Entry information : XtPGHS01
Entry ID 4272
Creation 2007-01-22 (Christophe Dunand)
Last sequence changes 2007-01-22 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2007-05-03 (Marcel Zamocky)
Peroxidase information: XtPGHS01
Name XtPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Amphibia Pipidae Xenopus
Organism Xenopus tropicalis    [TaxId: 8364 ]
Cellular localisation N/D
Tissue types Adipose tissue
Head
Lung
Spleen
Whole animal
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value XtPGHS01
start..stop
S start..stop
XlPGHS01 1132 0 1..588 1..587
GgaPGHS01 939 0 19..576 72..629
EcabPGHS01 907 0 25..575 32..582
OcuPGHS01 903 0 25..588 39..606
Literature and cross-references XtPGHS01
Literature Richardson,P., Lucas,S., Rokhsar,D., Detter,J.C., Ng,D.C., Brokstein,P. and Lindquist,E.A. DOE Joint Genome Institute Xenopus tropicalis EST project. Unpublished (2004) Zamocky M. et. al (2007) Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (in preparation).
Cluster/Prediction ref. UniGene:   Str.14357
Protein sequence: XtPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   588 (570)
PWM (Da):   %s   67667.52 (65768.5)  
PI (pH):   %s   7.35 (7.37) Peptide Signal:   %s   cut: 19 range:19-588
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAGLCLTVLF VIVTTSYSLE VSDKVNPCCY YPCQHKGVCV RFEMDKYLCD CTRTGYYGTN CTIPEWWTKF REFLRPSPAF YHYILTRFKW FWDIINSTFI RDVIVRLVLT VRSNLIPSPP  TYNSAYGYIS WEAYSNVSYF TRVLPPVPDD CPTPMGTKGK MELPDASLLV ETFLKREKFI PDPQGTNLLF AFFAQHFTHQ FFKTYGRMGR GFIKGFGHGV DLSHIYGDSL ERQHMLRLFT  DGKLKYQIIN GDIYPPTVVE APVFMIYPDN VPKEKQFAVG QEVFGLLPGL MMYATLWLRE HNRVCDILKK EHPTWDDEQL FQTTRLILIG ETIKIVIEDY VQHLSGYYLK LKFDPELLFG  VQFQYRNRIA VEFNQLYHWH PLIPEKFQIL EDEYSHSRFL YNTSILLDYG VEALVESFTK QIAGKIGGGK NHHPGLLKVA AGVIEESRKL RLQPFNEYRK RFGLKAYKSF KDLTGEEIMS 
AQLEELYGDI DALEFYLGLL LEKSNPNSIF GESMVEIGAP FSLKGLMGNP ICSPEYWKPS TFGGETGFNI VKTATIQKLV CLNVKQCPFV AFHVPDDVLP KLKKSDEL 

Retrieve as FASTA  
Remarks Complete sequence from 15 ESTs + 1 (DR841263).