Entry information : CbrPxt01
Entry ID 4278
Creation 2006-12-29 (Christophe Dunand)
Last sequence changes 2006-12-29 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2008-07-18 (Christophe Dunand)
Peroxidase information: CbrPxt01
Name CbrPxt01
Class Invertebrate peroxinectin    [Orthogroup: Pxt001]
Taxonomy Eukaryota Metazoa Chromadorea Rhabditidae Caenorhabditis
Organism Caenorhabditis briggsae    [TaxId: 6238 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbrPxt01
start..stop
S start..stop
CelPxt01 2811 0 1..1432 1..1432
CelPxt02 1306 0 64..1432 147..1490
CelPxt02 314 6e-88 52..632 822..1406
CbrPxt02 1305 0 64..1432 148..1491
CbrPxt02 318 2e-89 52..633 823..1408
CelPxt03 712 0 63..1339 80..1205
CelPxt03 295 1e-82 77..625 662..1207
CelPxt03 107 9e-24 1203..1361 394..548
Literature and cross-references CbrPxt01
Literature Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.
PLoS Biol. 1:166-192(2003).
Protein ref. UniProtKB:   A8XRK9
DNA ref. GenBank:   CAAC02000544 (320206..331190)
Protein sequence: CbrPxt01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1432
PWM (Da):   %s   160677.16  
PI (pH):   %s   7.45
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKQEVITSAA SRAVHLTEQL FNDTEKLMSD KFDGEFRNFS QSPKSLKSMV QFLPTENTKM KEICPVNQIE ECVIGKYRSY TGHCNNVKNP LNGASYERLK RFLPADYADG ISTPRSSKSG  QPLPSSRALS ALFTPSPSGH ATCSLLIAPF LSFIYDDIVH VPSNRIFKRD FYGNEKAMPL PCCRGNNSHP ECFEIPVPDD DSLQSKNVKC LPYSRSLLVP NPKCSFGQRQ QANMATSYLD  LSQIYGNTNG FVNRMRLFKD GKLALRAVGG FNNQMGVPPA NLDNSICRSS TGKPCLLAGN NRINFLPTSG AMYTIWMRQH NLIAEKLSLV NPHWDDQKLF EEGRRITIAQ FQHVTFNEMV  PVLVGKEQLR VMGIKLQNSG YDSGYDINID ASASNVFAAA AGQFFLTLLP SKFSIEDRKF ASRSESLLKH FNDPALIYEK GKIDGMLKFL LNAPIEKPGL HSSPLLRTAF QKKDEADSVD  IIAMVIQMGR DHGLPSYLQW RQFCKLEDVN SFLALQSIFK PSVNISDFER LYESPEDVDV FVGGLSEQPA KGSLLGPTFA CLFAHQMAQT KRGDRLWYEN FVSPSAFTAP QIDEIRKTTM  ARVVCDNTDT VTHVQHHAFS LPDDYGNCPL SCNSTGIIQP FDAKPFKDDE KLATLPITKE TIEKAIRLGL KQWQRYEEGE GRRISAQLSD SSPSALVSHA LLMAPKKESI DIARTASVLR  EATNILVTGN GLNKDEKLPD LDVETLQKIL PQIDIGSVIG NFTPFLARDP LPKEQCLPEP LPCDHTSKYR SYSGWCNNLK NPKFGNAFTQ MRRLLDPAYD DGFDTPRTRS VLGSELPSAR  KISNIVHSDA PKFHVKFTHM LMQFGQILDH DMMHSPISRG PKNTILNCSS CDSAQTLSIH CFPIKIEPDD PFFPARHSDG RPRCMPFARS LLAQVSLGYR NQLNQLTSFL DASTIYGSTQ  CEANKLRLFS DGKLNFTDLG FNKEALPQGN QERDCRSILQ NRQRRCFVAG DERSNEQPGL TAIHNIFLRE HNRIARYLKQ INNFWSDEKL FQEARRINIA QLQNIVYKEW LPVVLGCQNV  EKWGLMPQSS GYFEGYDDQC DATISQEMST SAFRFGHSLI RGVFTRMNDN FQNMTNHVNL TETFSNPSPV YDKNSGHMES ILMGLIGASS MAFDRHIVTA VRNHLFAKPG GPLTGLDLPA  VNIQRARDHG VQGYNAYRKY CGLRKASTFS DLRDTMTSDA VTALETAYAH VDDIDLFPGI MSESPTRGSL VGPTLACLIG EQMQRLKKCD RFYYETNDAM VRFTPDQLVE IRKASLSRII 
CDNSEYAANI QPNVFLMPDD LANSPMSCSE LPEMDLNKWV DRDYCLVDER VVNRGKTKRI TPCVTCTCTL EGPECHSITI NDCSRLFRDF SLADVQKDPV CLIQCSQQLK KL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (16 introns). Strain="AF16". Contain two animal peroxidase domains.