Entry information : CbrPxt04
Entry ID 4282
Creation 2006-12-29 (Christophe Dunand)
Last sequence changes 2006-12-29 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: CbrPxt04
Name CbrPxt04
Class Invertebrate peroxinectin    [Orthogroup: Pxt002]
Taxonomy Eukaryota Metazoa Chromadorea Rhabditidae Caenorhabditis
Organism Caenorhabditis briggsae    [TaxId: 6238 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbrPxt04
start..stop
S start..stop
CelPxt04 1301 0 1..770 1..773
CbrPxt05 801 0 1..770 3..717
CelPxt05 741 0 180..770 134..717
CelPxt05 74 0.00000000000006 6..97 12..98
CbrPxt02 441 8e-138 202..766 847..1415
CbrPxt02 222 5e-61 204..760 162..692
Literature and cross-references CbrPxt04
Literature Stein L.D., et al., The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLoS Biol. 1:166-192(2003).
Protein ref. UniProtKB:   A8XB53 [Incorrect prediction]
DNA ref. GenBank:   NC_013488.1 (3139380..3067259)
Protein sequence: CbrPxt04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   770 (752)
PWM (Da):   %s   83753.61 (81797.6)  
PI (pH):   %s   8.69 (8.59) Peptide Signal:   %s   cut: 19 range:19-770
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRTSFIVFLA ATFSVTLAAV TDETRQAVQD ALFQALNSVD SALTSEPSVA DGAIISSQTA NEESKKLQFT GDVLEVATQI LIQKYGVSIL PDANEVLNEL NAGNTEARKK RNSDSEESSF  VEGLRQKRQS RNRRQGGGGG GRGGGGSGGR GSQGGRSGED GRKKRNSGEN TSGGKSGDYS NPQTNKTCQG PPAQCSDPVH DRIRSITGYC NNRGKPTQAN SVTAIRRLLG TTSYTDGLGA  IRNKSVTGAP LPSARQISNK LHDEGSSPNF SPSINHLHMQ IGQFIAHDII FMPSSTAKDG SSLNCTSCSS PTTVSSNCAP IPAPADDKYF TPVSSTEARC IRLTRALNGQ SGFGVRTQID  QNSHYLDMSS VYGSSDCEAR TVRSFVNGQL ATNTAMGYVL PPQAKNDTNC QSTNPYYCFT AGDFRNSLHP GLLPLHTVFI KEHNRLAVMT KSAKPSWNDE QIYQFVRRVM VAQWQHIVYN  EYLPKLLTDK YMTDFNLKTM KPGAGAFTGY STSMNAALSG EFAAAAFRFG HSQSRQDFAR QDASNKTIKT YDLGYNIFYT DELYKISYGG WETMLMGLIK TAAMQVDRYA SFPIRNQLFE  IRGKNASGVD LISVNIMRGR DVGLLPYVKY RSLVGLTSVN TWNDLSSTFS AANLAALRTV YADPADIDLF TGLVMETPLS GGQLGPTASW IIAEQFRALK TGDRFYYENQ VANTVGFTPQ 
QIDVIRRVKL AKIFCQNTDI ITSINTDMFD LNSSQVSCSS IPDIDLNKLF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5). The first Five AA are missing in the SwissProt/TREMBL prediction, added by the PeroxiBase Team. Strain="AF16".