Entry information : BnPrx52-2_other
Entry ID 4291
Creation 2009-08-14 (Christophe Dunand)
Last sequence changes 2009-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2009-08-14 (Christophe Dunand)
Peroxidase information: BnPrx52-2_other
Name BnPrx52-2_other
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue types Roots
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx52-2_other
start..stop
S start..stop
BoPrx52-1Cb_other 654 0 1..325 1..325
BrPrx52-1Ab_other 652 0 1..325 1..325
BstrPrx47 592 0 1..325 1..324
TsPrx52 585 0 1..325 1..324
Literature and cross-references BnPrx52-2_other
Literature Selvaraj,G., Kurylo,E., Hirji,R. and Datla,R. Transcriptome analysis of early seed development in canola
EST ref. GenBank:   EE485257.1 [5' end]   EV217433.1 [3' end]   DY005772.1 [Fragment]
Cluster/Prediction ref. UniGene:   Bna.9670
Protein sequence: BnPrx52-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (305)
PWM (Da):   %s   34071.92 (31959.7)  
PI (pH):   %s   7.98 (7.98) Peptide Signal:   %s   cut: 21 range:21-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNNLFIAI LAIVVTLSLQ GDNNNVVQAQ LTTNFYSTSC PNLLSTVRST VKSAVDSQPR TGASILRLFF HDCFVNGCDG SILLDDTSSF TGEQNANPNR NSARGFNVID NIKTAVEAAC  PGVVSCADIL AIAARDSVVL LGGPNWNVKV GRRDARTASQ AAANSNIPAP TSSLSQLISS FSAVGLSTRD MVALSGAHTI GQSRCTNFRT RVYNETNINA AFATLRQRSC PRAAGSGDGN 
LAPLDVNSAN TFDNSYFKNL VAQRGLLHSD QELFNGGSTD SIVTGYSNNP ASFSSDFTAA MIKMGDISPL TGSSGEIRKV CGRTN 

Retrieve as FASTA  
Remarks Complete sequence from 8 ESTs. Cultivar="DH12075 (double haploid line from Cresor x Westar cross)".