Entry information : DdBCP01
Entry ID 4316
Creation 2007-01-29 (Filippo Passardi)
Last sequence changes 2012-05-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-23 (Christophe Dunand)
Peroxidase information: DdBCP01
Name DdBCP01
Class Atypical 2-Cysteine peroxiredoxin (type BCP)    [Orthogroup: BCP001]
Taxonomy Eukaryota Dictyostelium
Organism Dictyostelium discoideum (Slime mold)    [TaxId: 44689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value DdBCP01
start..stop
S start..stop
DdBCP02 213 6e-72 46..196 1..152
DdBCP07 194 2e-64 46..196 1..151
DdBCP05 184 2e-60 46..198 1..153
DdBCP04 184 2e-60 46..198 1..153
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 922384..922701 318 N° 2 921811..922089 279  
complement(join(921811..922089,922384..922701))


exon

Literature and cross-references DdBCP01
Literature Gloeckner,G., Eichinger,L., Szafranski,K., Pachebat,J., Dear,P.,
Lehmann,R., Baumgart,C., Parra,G., April,J.F., Guigo,R., Kumpf,K.,
Tunggal,B., Cox,E., Quail,M.A., Platzer,M., Rosenthal,A. and
Noegel,A.A. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Nature 418 (6893), 79-85 (2002)
Protein ref. UniProtKB:   Q552Z0
Cluster/Prediction ref. UniGene:   Ddi.600
Protein sequence: DdBCP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   198
PWM (Da):   %s   21937.58 Transmb domain:   %s   o15-37i
PI (pH):   %s   9.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLLLQNFNQQQNSNLIIQLIVAGVIIILISKFFILPFLSNKSSSKMTKLKVGDQAPDFTASDKDGKSYSLKDFADKVLVLYFYPKDSTPGCTKEACSFRDNYEQFTEAGAVVVGVSSDDAESHSKFSAKYRLPFTLLTDNKGEMAKKYGVKKELLLIPGRSTFIIDKNQKIALIHSSLLNAESHITESLKVIEQLKSQ*

Retrieve as FASTA  
Remarks Complete sequence from Genomic DNA (Chromo 2 , 2 exons) and 3 ESTs. Strain="AX4". Two different TREMBL accessions: Q552Z0 or Q869K6 (without N-terminal extension). The ESTs contain the N-Term extension.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATTACTTCAAAATTTTAACCAACAACAAAACTCAAATTTGATAATACAATTAATTGTTGCAGGTGTTATTATTATTTTAATTTCTAAATTTTTCATTCTTCCATTTCTTTCTAAT
AAATCATCCTCAAAAATGACAAAATTAAAAGTTGGTGACCAAGCCCCTGATTTTACAGCTTCTGATAAAGATGGTAAATCATATTCATTAAAAGATTTTGCAGATAAAGTTTTAGTTCTT
TATTTTTATCCAAAAGATTCAACACCTGGATGTACCAAAGAAGCTTGTTCATTTAGAGATAATTATGAACAATTCACT
GTAATATTACCTAAAATTAAAATTAAAAAAAAAAAATAACAA
TAATAAATTAGTACTAACATTAATAATTACAATTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT
AATAATAATAATAATAATAATAATAATAATAATAATAAAAATAATAATTAATTATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAATTGGGAAAATAAAATAATAATTAATAAAA
AAAAAATTAAAGGAAGCAGGAGCAGTTGTAGTAGGTGTTTCATCAGATGATGCAGAAAGTCATTCAAAATTCTCTGCAAAATATAGATTACCATTCACATTACTTACCGATAATAAAGGT
GAAATGGCTAAAAAATATGGAGTAAAGAAAGAGTTATTATTAATTCCAGGTAGATCAACCTTTATCATTGACAAGAATCAAAAGATTGCTTTAATTCATAGTTCACTTTTAAATGCTGAA
TCTCATATCACTGAATCTTTAAAAGTTATTGAACAATTAAAATCACAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATTACTTCAAAATTTTAACCAACAACAAAACTCAAATTTGATAATACAATTAATTGTTGCAGGTGTTATTATTATTTTAATTTCTAAATTTTTCATTCTTCCATTTCTTTCTAAT
AAATCATCCTCAAAAATGACAAAATTAAAAGTTGGTGACCAAGCCCCTGATTTTACAGCTTCTGATAAAGATGGTAAATCATATTCATTAAAAGATTTTGCAGATAAAGTTTTAGTTCTT
TATTTTTATCCAAAAGATTCAACACCTGGATGTACCAAAGAAGCTTGTTCATTTAGAGATAATTATGAACAATTCACT
GAAGCAGGAGCAGTTGTAGTAGGTGTTTCATCAGATGATGCA
GAAAGTCATTCAAAATTCTCTGCAAAATATAGATTACCATTCACATTACTTACCGATAATAAAGGTGAAATGGCTAAAAAATATGGAGTAAAGAAAGAGTTATTATTAATTCCAGGTAGA
TCAACCTTTATCATTGACAAGAATCAAAAGATTGCTTTAATTCATAGTTCACTTTTAAATGCTGAATCTCATATCACTGAATCTTTAAAAGTTATTGAACAATTAAAATCACAATAA

Retrieve as FASTA