Entry information : BrPrxII03_other (BrPrxIIC)
Entry ID 4339
Creation 2007-01-31 (Christophe Dunand)
Last sequence changes 2007-01-31 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-11-26 (Christophe Dunand)
Peroxidase information: BrPrxII03_other (BrPrxIIC)
Name (synonym) BrPrxII03_other (BrPrxIIC)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Roots
Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrxII03_other
start..stop
S start..stop
AtPrxII02 321 7e-115 1..162 1..162
AlyPrxII02 319 2e-114 1..162 1..162
AtPrxII03 314 2e-112 1..162 1..162
AlyPrxII03 313 9e-112 1..162 1..162
Literature and cross-references BrPrxII03_other (BrPrxIIC)
Literature Choi Y.O., Cheong N.E., Lee K.O., Jung B.G., Hong C.H., Jeong J.H., Chi Y.H., Kim K., Cho M.J., Lee S.Y. Cloning and expression of a new isotype of the peroxiredoxin gene of Chinese cabbage and its comparison to 2Cys-peroxiredoxin isolated from the same plant.
Biochem. Biophys. Res. Commun. 258:768-771(1999).
Protein ref. UniProtKB:   Q9XF72
mRNA ref. GenBank:   AF133302
Protein sequence: BrPrxII03_other (BrPrxIIC)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   162
PWM (Da):   %s   17307.97  
PI (pH):   %s   5.26
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPIAVGDVV PDGSISFFDE NDQLQTVSVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF VADGSGEYTK LLGLELDLKD 
KGLGVRSRRF ALLIDNLKVT VANVESGGEF TVSSADDILK AL 

Retrieve as FASTA  
Remarks Complete sequence from 1 cDNA and 8 ESTs (ssp. pekinensis: CV432742, CV432754, CV544917, CV545713, BG543590, BG544772 other: DY013406, CX272345, CX266368, DQ296178). Two identical TREMBL accessions Q9XF72 and Q2V612.