Entry information : ToPrx15
Entry ID 435
Creation 2008-12-02 (Christophe Dunand)
Last sequence changes 2008-12-02 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2008-12-02 (Christophe Dunand)
Peroxidase information: ToPrx15
Name ToPrx15
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Taraxacum
Organism Taraxacum officinale (dandelion)    [TaxId: 50225 ]
Cellular localisation N/D
Tissue types Hypocotyls
Roots
Inducer Fusarium infection
Repressor N/D
Best BLASTp hits
Perox score E-value ToPrx15
start..stop
S start..stop
LvPrx15 553 0 1..298 1..296
LperPrx15 547 0 1..298 1..298
HaPrx36 526 0 1..298 1..295
LsaPrx15 524 0 1..298 1..296
Literature and cross-references ToPrx15
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and van Dijk,P. Dandelion ESTs from the Compositae Genome Projec.
EST ref. GenBank:   DY831370 [5' end]
Protein sequence: ToPrx15
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   298 (272)
PWM (Da):   %s   32239.25 (29395.6) Transmb domain:   %s   o4-26i
PI (pH):   %s   8.47 (8.27) Peptide Signal:   %s   cut: 27 range:27-298
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRVNFIQIL SLSVLFLIIF PNLGSAQLKQ NYYATICPNV ETIVRNAVRA KIQQTFVTIP GTLRLFFHDC FVQGCDASVM IASSGSNKAE KDHPDNLSLA GDGFDTVIKA KAAIDAVASC  RNKVSCADIL TMATRDVVLL AGGPSYPVEL GRLDGLSSTA ASVTGKLPKP NMNLNQLNSL FSATGLTQTD MIALSGAHTL GFSHCDQFSN RIYNFSKTNT VDPTMNPSYA VQMQQQCPKN 
VDPRIAVNMD PNTPRTFDNV YYKNLQRGQG LFTSDQILFS DSRSKPTVDA WALSSKAF 

Retrieve as FASTA  
Remarks Partial sequence from 9 ESTs. 3' end is missing. Some of the ESTs present similar mismatches: DY824878, DY824823, DY829617, DY819698, DY830283