Entry information : AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Entry ID 4353
Creation 2007-01-18 (Christophe Dunand)
Last sequence changes 2015-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-09 (Achraf Jemmat)
Peroxidase information: AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Name (synonym) AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation N/D
Tissue types Buds
Mixed tissues
Roots
Siliques
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtPrxII05
start..stop
S start..stop
AlyPrxII05 428 5e-155 1..234 1..231
ThasPrxII02 347 9e-123 22..234 22..232
LuPrxII02 291 1e-100 1..234 1..230
LuPrxII16 290 1e-100 1..234 1..228
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 19639699..19640403 705  
join(19639699..19640403)


exon

Literature and cross-references AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Literature EU Arabidopsis sequencing, project
Protein ref. UniProtKB:   Q9LF96   Q949U7 [Mismatch]
DNA ref. Phytozome 11:   Chr3 (19639699..19640403)
Cluster/Prediction ref. Phytozome Gene 11:   19659150 UniGene:   At.9858
Omic ref. AtProteome:   At3g52960 ATTED-II:   At3g52960 e-FP Browser:   At3g52960 ePlant:   At3g52960 Genevestigator:   At3g52960 TAIR:   At3g52960
Protein sequence: AtPrxII05 (At3g52960 / PRXIIE / PeroxiredoxinIIE / Thioredoxinreductase2E / AtPrxIIE)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   234
PWM (Da):   %s   24555.8  
PI (pH):   %s   9.57
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATSLSVSRF MSSSATVISV AKPLLSPTVS FTAPLSFTRS LAPNLSLKFR NRRTNSASAT TRSFATTPVT ASISVGDKLP DSTLSYLDPS TGDVKTVTVS SLTAGKKTIL FAVPGAFTPT 
CSQKHVPGFV SKAGELRSKG IDVIACISVN DAFVMEAWRK DLGINDEVML LSDGNGEFTG KLGVELDLRD KPVGLGVRSR RYAILADDGV VKVLNLEEGG AFTNSSAEDM LKAL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, no intron), 7 cDNA and 84 ESTs. Two TREMBL accession Q9LF96 and Q949U7 (one mismatch).
Promoter
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTGCATCA ACTGATTTGT AGAGCTAAAG TAGTGTGTAT ATACTATCTA TAACTTAATT TATCCTATGA AGTAGAAGTT GAATAAATTT ATAACAAGGT AACGATCAAA TGTTTAGAAT  TAGGATCCCA ACCAAGGCCT CTCCATGTAG CAAAACAAAA CATAACCTAA GGACGAGTAG AATATTTCAC GGTCGATATC ACTGAAAATC ACGTAAGACA AATTGTATAG GTAATGCATT  TTGTAAAATC AACTCTTTCA TTTTTTCTGG AAGAAAAACA ACTCTTTCAT TAATATGATA TTTACAATTT AGCAAAAGAA AAAAATGGAT AGTTAGAATA ATAGACGCAT ATTTCTTCTC  AGCTATATAG TATTCGAATT GCGTTGAAAA ATGAATTGGT TTTTTTTATC ATTATTGTCG ATTGTCATCA GCCATCACTA AAAATGATTC ACCCATAAGC TAAAAAAAAA ACAATATGAT  ACTCAAAACT TGCCCATGTG AAATAGAAAA TCTTTAACAT CTTACACATC ATGACATAAA AGCCTCCAAC ATGAATAAAA TAGTTAGTAT ATCTAAACGT CAAGACAAGC GCTCCTGATC  GAACCAAGTC TTAAGCATAT ACAGGAACAA ACCAGAAACT TTTTGAGCAA ACGTATCCTT TAATGATGTC ATCATAAGCG TTGCCAAAAA AAAGAACATC TTTGATTGTG ACCCCATGAC  CAAATATCAA CAACTCACCT CCAAGAGAAT GTACTCTTTC CCAGTTACTA CTTTCAAAAT TCATCTTGAA GATGTAAAAC AAGCGTGAGT TTTGTAACCG TTTAATGCTC ACAGCGATCA  AAACATCCAT TGAGTTCGTA ATCGCAATCC TCGTCTTCCC ACCGTATTCC CCAAGTTGGT TATCAAAGCA AAACGGATGG TCACGGTACG GGTTTCCTTG GACGATTTCT TTTGGGAAAG  CTCCAGAGAA ATCAAGTCTT GATGTAGCTA TCAATTGTAT ACACATAAAG CTTATCGTCT TTATAAGTCA TGTGTGTACA ATATATGTCT TCAACATTCC ACCAATAATC ATCTTCATTC  TTGTATGTGA ACAAACAGTT TTCTTCGGTA ATACAAGCTA CAACATAATC CTTTGTTCTC TCGTTTATCC AAAAACAAGC CAAATTTTTG AGAGGAGACG TCAATTTGGT TTGTTTTCCT  TTATATGACT TCATTGATGG AAGATTGATC ATCTCGCGAG TAAACACGTT CAAAAGATAT AAGAAATCTA AACTAGGATC ATTCATCAAG AGCCAACTAC TCCAACTAGC CATAACAAAG  CTTTTCAATA AATCAAATCC AAGACATTCT ACTTCGAAGG AGAATTCGCG ATCTTCACTG TGATGACCCA AAAAAGTACC ATCCTCGTCG CGCATAAGTT GCCATGGATA CCATATAGGT  CGCGTACATG ATCTTGAAAC TAAATACCAT TGTGAGCAAA CGCTCCTCGC TCGATGATAA TCCTTAGTCT CTAATCCTTC AAAGATTGAT CTCAAAATAT CGAAACAAAG GTTGGACCAA  TCACTACGAA TTCTAGACAT TCTCTCCGTA GTGCCTACGA TACCAATGGA AACCTAATTT GTTTTTTTTT TTTGGCATCA ACCCTCTTTA AAAGCAAATA TATAAATATC AAAGCCTTAG  GAACAAGGCG GTGAAAACAA TGTAGGCCCA TTAAGGCCCA ATAACGGCGT TAGGAAATTC CAAATTATTT TGAAAAAGCT TTCCGATTTC ACGCTCTTTT CCTCTTCCCT CCAATCTCAT  TGTGTCCACC ATTTTTTGCA TCAACCCTAT TTAAAAGCAA ATATGTAGAT ATTAAAGAAT GCGGTGAATA ATACAATTTA GGCCCACTAA GGATCAGGCG GTGAAAACAA TGTAGGCCCA 
ATAATGACAT AGCCTTTCAT CTTTCTCTAC TCAATCCAAA ACAAACCTCA AGTCACACAC TCTTCACCTA AACAGCATCA 

Retrieve as FASTA  
Terminator +
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Send to cis Analysis
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTCTTATGAT TTTCTCATCA ATTTCGTCTT CTTCTCTGTT TTGAATTTTC TTTACTCTGT TTTGTGTTGC TGTTTCTTTA AATCTACGAA TCATTATCGG ATTTGTAATG GAATAATGAA  GTTAGAGGTT CTGTTGTTTG TGAACATTTT AGAAAAGCGT TGTGTTTAGT TTTCGGATGT TACTACTTTT GGTTAATTTT TTCTCTTTTG ACTTTTATAA TTTTGATTGA GTTTAGGTAT  TAACCTAACA CTTACTGATA GTTTGTCACA GTGACAAGTT AATATAAACA TGTAATGAAA ATTTTCCACT TAAAAATTCA TGAAATAGAG CTATTAATTT CTAGAAAAAG TTAACTTATC  GAAGTCGGGT TCTCTGAAAC GTGTTGCTGA TCACCGGTCG GTCAGGGATT TGGTCCGGAG TAAGTCTTAT GATATGGAGA GGTTTTGACC ATAAAATCCT CTTGGTAAAA CATTAGTAAG  ATACCAACCC AAAGACCTCT CCAAAAGGCA CGTTTTTTTA TTATTATACT ACTTGACATG ATCCTTTTTT TTTCCTCGGT GCATCTTTGA TATGATTATC TTAAGTTTAA GGAGCATAAT  GAATTACCTT TTCAATTGAT CTATGTAGAG TAATGGAGAT TGGAGACCAA CAAGCAACAA TCCTGACTTT TGGAAAGGAC GTTGGGGTTG GTTGCTAGTT GGATGCCACG TCTACGTGCT  AACGTATGCA TTGATGCACA AATAGCGAAA AACTTTAGTT TATATCCTTT TTTTTATAAC AAAACAGACA ATAAAGCCCA AATGTGGTCA GCTTCACTAC TGGATCGGCT ATGTCAGTTT  ACCGAATCAA ATCTCCCACA ATAACGCCAA ATTATTCTTA GATATTTTTT TCTTTTTCTT TTGGGTACAA ATATCGGATT GCTTTGATGA TTTGAAGTGT TCAAGTACAC TGTACACATG 
CATGTAAAGA AAACAAAGAG AAAAGAAGAA AAGAAATTAA G 

Retrieve as FASTA  
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTT CTCTCTCCGT TTCTAGATTC ATGTCCTCCT CCGCCACCGT TATCTCCGTC GCTAAGCCGT TACTTTCCCC CACCGTATCC TTCACCGCGC CGCTCTCCTT CACACGCTCT  CTCGCTCCTA ATCTCTCTCT CAAATTCCGC AACCGCCGCA CCAATTCCGC CTCCGCCACC ACCAGATCCT TCGCTACGAC ACCCGTCACC GCCTCCATTT CCGTCGGAGA CAAGCTCCCA  GACTCCACTC TCTCCTACCT CGATCCATCC ACCGGAGACG TCAAAACAGT AACCGTCTCA TCCCTAACCG CCGGGAAGAA AACAATCCTA TTCGCCGTTC CCGGCGCATT CACACCAACA  TGCTCACAAA AACACGTCCC TGGATTCGTA TCCAAAGCCG GAGAACTCAG ATCTAAAGGC ATCGATGTAA TCGCATGTAT CTCCGTCAAC GACGCGTTCG TGATGGAAGC GTGGAGGAAA  GATCTTGGAA TTAACGATGA GGTAATGTTG CTATCCGATG GAAATGGCGA ATTCACAGGG AAGCTTGGTG TTGAATTGGA TTTGAGGGAT AAGCCTGTGG GACTTGGAGT TAGGTCAAGG 
AGATATGCGA TTTTGGCTGA TGATGGTGTT GTGAAAGTTC TGAATCTTGA AGAAGGAGGT GCTTTTACTA ATAGTAGTGC TGAGGATATG CTTAAAGCTC TCTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGACTT CTCTCTCCGT TTCTAGATTC ATGTCCTCCT CCGCCACCGT TATCTCCGTC GCTAAGCCGT TACTTTCCCC CACCGTATCC TTCACCGCGC CGCTCTCCTT CACACGCTCT  CTCGCTCCTA ATCTCTCTCT CAAATTCCGC AACCGCCGCA CCAATTCCGC CTCCGCCACC ACCAGATCCT TCGCTACGAC ACCCGTCACC GCCTCCATTT CCGTCGGAGA CAAGCTCCCA  GACTCCACTC TCTCCTACCT CGATCCATCC ACCGGAGACG TCAAAACAGT AACCGTCTCA TCCCTAACCG CCGGGAAGAA AACAATCCTA TTCGCCGTTC CCGGCGCATT CACACCAACA  TGCTCACAAA AACACGTCCC TGGATTCGTA TCCAAAGCCG GAGAACTCAG ATCTAAAGGC ATCGATGTAA TCGCATGTAT CTCCGTCAAC GACGCGTTCG TGATGGAAGC GTGGAGGAAA  GATCTTGGAA TTAACGATGA GGTAATGTTG CTATCCGATG GAAATGGCGA ATTCACAGGG AAGCTTGGTG TTGAATTGGA TTTGAGGGAT AAGCCTGTGG GACTTGGAGT TAGGTCAAGG 
AGATATGCGA TTTTGGCTGA TGATGGTGTT GTGAAAGTTC TGAATCTTGA AGAAGGAGGT GCTTTTACTA ATAGTAGTGC TGAGGATATG CTTAAAGCTC TCTGA 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGTCACACA CTCTTCACCT AAACAGCATC AATGGCGACT TCTCTCTCCG TTTCTAGATT CATGTCCTCC TCCGCCACCG TTATCTCCGT CGCTAAGCCG TTACTTTCCC CCACCGTATC  CTTCACCGCG CCGCTCTCCT TCACACGCTC TCTCGCTCCT AATCTCTCTC TCAAATTCCG CAACCGCCGC ACCAATTCCG CCTCCGCCAC CACCAGATCC TTCGCTACGA CACCCGTCAC  CGCCTCCATT TCCGTCGGAG ACAAGCTCCC AGACTCCACT CTCTCCTACC TCGATCCATC CACCGGAGAC GTCAAAACAG TAACCGTCTC ATCCCTAACC GCCGGGAAGA AAACAATCCT  ATTCGCCGTT CCCGGCGCAT TCACACCAAC ATGCTCACAA AAACACGTCC CTGGATTCGT ATCCAAAGCC GGAGAACTCA GATCTAAAGG CATCGATGTA ATCGCATGTA TCTCCGTCAA  CGACGCGTTC GTGATGGAAG CGTGGAGGAA AGATCTTGGA ATTAACGATG AGGTAATGTT GCTATCCGAT GGAAATGGCG AATTCACAGG GAAGCTTGGT GTTGAATTGG ATTTGAGGGA  TAAGCCTGTG GGACTTGGAG TTAGGTCAAG GAGATATGCG ATTTTGGCTG ATGATGGTGT TGTGAAAGTT CTGAATCTTG AAGAAGGAGG TGCTTTTACT AATAGTAGTG CTGAGGATAT  GCTTAAAGCT CTCTGATTCT TATGATTTTC TCATCAATTT CGTCTTCTTC TCTGTTTTGA ATTTTCTTTA CTCTGTTTTG TGTTGCTGTT TCTTTAAATC TACGAATCAT TATCGGATTT 
GTAATGGAAT AATGAAGTTA GAGGTTCTGT TGTTTGTGAA CATTTTAGAA AAGCGTTGTG TTTAGTTTTC GGATGTTACT ACTTTTGGTT AATTTTTTCT CTTTTGACTT TT 

Retrieve as FASTA