Entry information : TmaCMD (Tm1620 / Apx4843)
Entry ID 4560
Creation 2007-02-08 (Filippo Passardi)
Last sequence changes 2007-02-08 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-04-12 (Christophe Dunand)
Peroxidase information: TmaCMD (Tm1620 / Apx4843)
Name (synonym) TmaCMD (Tm1620 / Apx4843)
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Bacteria Thermotogae Thermotogae (class) Thermotogaceae Thermotoga
Organism Thermotoga maritima    [TaxId: 2336 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TmaCMD
start..stop
S start..stop
TpCMD 240 2e-84 1..121 1..121
TmeCMD 177 2e-59 1..121 1..121
FnoCMD 170 2e-56 2..121 11..127
HorCMD 140 1e-44 4..105 5..106
Literature and cross-references TmaCMD (Tm1620 / Apx4843)
Literature REFERENCE 1 Nelson K.E. et al. Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima. Nature 399:323-329(1999).

REFERENCE 2 Kim,Y., Joachimiak,A., Brunzelle,J.S., Korolev,S.V., Edwards,A., Xu,X. and Savchenko,A. Crystal Structure Analysis Of Thermotoga Maritima Protein Tm1620 (Apc4843)
Protein ref. UniProtKB:   Q9X1V5
DNA ref. GenBank:   AE000512.1 (1608357..1608722)
Protein sequence: TmaCMD (Tm1620 / Apx4843)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   121
PWM (Da):   %s   13667.14  
PI (pH):   %s   6.52
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEYKKFVEAR RELNEKVLSR GTLNTKRFFN LDSAVYRPGK LDVKTKELMG LVASTVLRCD DCIRYHLVRC VQEGASDEEI FEALDIALVV GGSIVIPHLR RAVGFLEELR EMEKNGETIS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. This protein was crystallised in his homohexameric form (NCBI accessions: 1P8C_A to F). Strain="ATCC 43589 / MSB8 / DSM 3109 / JCM 10099".