Entry information : RmHCMDn
Entry ID 4594
Creation 2007-02-15 (Filippo Passardi)
Last sequence changes 2007-02-15 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-04-30 (Christophe Dunand)
Peroxidase information: RmHCMDn
Name RmHCMDn
Class Hydrolase-CMD fusion (no peroxidase activity)    [Orthogroup: HCMDn001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Cupriavidus
Organism Ralstonia metallidurans (Cupriavidus metallidurans)    [TaxId: 119219 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RmHCMDn
start..stop
S start..stop
ReHCMDn_H16 636 0 1..390 1..390
ReHCMDn_JMP134 632 0 1..390 1..390
SuHCMDn 299 2e-99 1..386 1..376
RopHCMDn 285 1e-93 11..387 5..386
Literature and cross-references RmHCMDn
Literature Copeland A. et al.

US DOE Joint Genome Institute

Complete sequence of the megaplasmid of Ralstonia metallidurans
CH34

Unpublished
Protein ref. GenPept:   ABF10884 UniProtKB:   Q1LG42
DNA ref. GenBank:   CP000353 (439359..440537)
Protein sequence: RmHCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   392
PWM (Da):   %s   42367.76  
PI (pH):   %s   5.85
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPYLDQAGAR LFYTVDGPED APVIVFSNSL GTDHTMWQPQ ADALAGRFRV VRYDVRGHGR STTTETSLTV ETLGRDVLAI LDALHVDKAV FCGLSMGGLT GMWLGAYAPE RFSKIVLANT  APKIGTAESW NTRIDAVIRD GLGGMVDASL GRWFTPTFVA TSGRALDDLR AVLAGLDPRG YAASCAAVRD ADLREAVKTM PVPVLVIAGS DDPSTTAEEG RALAAAIPGA IYVELHAAHL  SNREQPGRFT AALLDFINGR LPVTDDQARY DAGLAVRREV LGSAHVDRSL QRLTPLNEEF QNLITRYAWG EIWTREGLPR HSRSLITIAM MVALNRSEEL KLHLRAAANN GVTRDEIKEV 
LLQTAIYCGV PAANSAFHMA GEVFAELDRA RG 

Retrieve as FASTA  
Remarks Complete sequence from Genomic (megaplasmid). Strain="CH34 / ATCC 43123 / DSM 2839". Member of protocatechuate-degrading gene clusters (pcaC, pcaH, pcaG, pcaB).