Entry information : MYspHCMDn_JLS (Mjls_1679)
Entry ID 4595
Creation 2007-02-16 (Filippo Passardi)
Last sequence changes 2007-02-16 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-04-08 (Christophe Dunand)
Peroxidase information: MYspHCMDn_JLS (Mjls_1679)
Name (synonym) MYspHCMDn_JLS (Mjls_1679)
Class Hydrolase-CMD fusion (no peroxidase activity)    [Orthogroup: HCMDn001]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Mycobacteriaceae Mycobacterium
Organism Mycobacterium sp.    [TaxId: 1785 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MYspHCMDn_JLS
start..stop
S start..stop
MYspHCMDn_MCS 781 0 1..393 1..393
MYspHCMDn_KMS 781 0 1..393 1..393
MgiHCMDn 778 0 1..393 1..393
MvaHCMDn 739 0 1..393 1..393
Literature and cross-references MYspHCMDn_JLS (Mjls_1679)
Literature Copeland A. et al. US DOE Joint Genome Institute (JGI-PGF). Complete sequence of Mycobacterium sp. JLS.
Protein ref. UniProtKB:   A3PX42
DNA ref. GenBank:   CP000580.1 (1777290..1778471)
Protein sequence: MYspHCMDn_JLS (Mjls_1679)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   393
PWM (Da):   %s   41255.16  
PI (pH):   %s   4.99
Sequence
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Send to Peroxiscan
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MSNPPLTAIH LGGPDDGPLL LLGPSLGTTT ATLWTGVAQR LVDHVRVVGW DLPGHGRGRR AHPFTIADLA AAVLVIADDL NVETFHYAGD SVGGCVGLQL LLDAPQRVSS ATLLCTGAAI  GTPDGWLARA ATVRAGGVDT MLTGAAERWF APGFVDREPG TASALLDALS HTDAESYAQV CEALAVFDVT DRLSEIVTPV LAVAGSADSP TPPESLRRIA SDVKDGDLVV LEGVGHLAPA  EAPERVAGLI AEIVGVPQPP SKSLEDVHRA GMAVRREVLG HAHVDRAVAG TTDLTADFQH MITQYAWGSI WTRPGLDFRS RSMITLTALV ARGHHEELAM HLRAARRNGL SNDEIKELLL 
QTAIYCGVPD ANSAFRIAAE VLPEFDEHPG APS 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="JLS".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCAATC CGCCTCTCAC CGCCATCCAC CTCGGCGGAC CCGACGACGG GCCGCTGCTT TTGCTGGGCC CCTCGCTGGG GACAACGACG GCCACCCTGT GGACAGGCGT GGCGCAACGA  CTGGTCGATC ATGTGCGCGT AGTCGGATGG GACCTTCCCG GTCACGGCCG CGGCCGTCGG GCCCACCCGT TCACCATCGC CGACCTCGCG GCAGCGGTGC TGGTGATCGC GGACGACCTT  AACGTGGAGA CATTCCACTA CGCCGGTGAT TCGGTGGGTG GTTGCGTCGG TCTGCAGCTG CTGCTCGATG CTCCGCAACG GGTCAGCTCG GCGACCCTGC TGTGCACCGG CGCCGCCATC  GGCACCCCGG ACGGCTGGCT CGCACGTGCC GCTACCGTCC GCGCCGGCGG TGTCGACACG ATGCTGACCG GCGCAGCCGA GCGCTGGTTC GCGCCGGGCT TTGTCGACCG CGAGCCGGGG  ACCGCCTCGG CGCTGCTGGA TGCCCTGAGT CACACCGATG CGGAGTCCTA TGCGCAGGTA TGCGAAGCGT TAGCAGTGTT TGATGTAACC GATAGGTTGT CCGAGATCGT CACTCCGGTC  CTGGCCGTTG CGGGTAGCGC TGACAGCCCC ACGCCGCCGG AATCGTTGCG GCGCATCGCC TCCGACGTAA AGGACGGGGA CCTGGTGGTG CTCGAAGGCG TCGGACACCT GGCCCCCGCC  GAAGCGCCGG AGCGCGTGGC CGGCCTCATC GCAGAGATCG TCGGTGTTCC GCAGCCCCCG AGCAAGTCCC TCGAAGACGT GCACCGTGCA GGAATGGCGG TACGGCGGGA GGTGCTGGGC  CATGCGCACG TCGACCGGGC AGTGGCCGGT ACCACCGACC TGACCGCCGA CTTCCAGCAC ATGATTACGC AGTATGCCTG GGGCAGCATC TGGACCCGCC CGGGTCTCGA CTTCCGCAGC  CGCTCGATGA TCACGCTGAC GGCGCTGGTC GCGCGCGGTC ACCACGAGGA ACTGGCGATG CACCTGCGGG CGGCCCGCCG GAACGGTCTG AGCAACGACG AGATCAAAGA GCTGCTCTTG 
CAGACCGCGA TCTACTGCGG AGTTCCCGAC GCCAACTCCG CCTTCCGCAT CGCCGCCGAG GTCTTGCCGG AGTTTGACGA GCACCCAGGT GCGCCGTCAT GA 

Retrieve as FASTA