Entry information : AniCMDn
Entry ID 4651
Creation 2007-02-14 (Filippo Passardi)
Last sequence changes 2007-02-14 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-04-23 (Catherine Mathe (Scipio))
Peroxidase information: AniCMDn
Name AniCMDn
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn001]
Taxonomy Eukaryota Fungi Ascomycota Eurotiomycetes Trichocomaceae Emericella
Organism Aspergillus nidulans-Emericella nidulans    [TaxId: 162425 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AniCMDn
start..stop
S start..stop
AorCMDn01 354 2e-125 19..230 31..245
AfumCMDn01 293 1e-101 28..231 42..243
GzCMDn02 198 6e-65 28..226 1..187
GzCMDn01 198 1e-64 28..220 1..184
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1574345..1575049 705  
complement(join(1574345..1575049))


exon

Literature and cross-references AniCMDn
Literature Birren B. et al.

Sequencing of Aspergillus nidulans and comparative analysis with A.
fumigatus and A. oryzae

Nature 438 (7071), 1105-1115 (2005)
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=AACD01000089&itemID=73&view=gbwithparts
Protein ref. GenPept:   EAA62413 UniProtKB:   Q5B2J8
DNA ref. JGI genome:   ChrV_A_nidulans_FGSC_A4 (1575049..1574345)
Protein sequence: AniCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   234
PWM (Da):   %s   25568.51  
PI (pH):   %s   7.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNLKSLFRIE ARPLLQFRRL STTRSSKMRL PYAPSEPPTA DPETAEIYAR IAARRRPRPL IPLDLSLLHS PPVADGWNSF LGAIRTQTVV DQGLLELAVS RVAVITQAVY EWNAHAPLAL 
KGGIKPEELH AVRTLPSTAT GDVDAAVKAL GQSALTPQQR AIVRYADEMT QTVKVQDETF AQLQKEGFSD REIVELTTGI ACYNCVSRVL VALDVGENNA REMKSVDELV AGLK 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Chromosome 5. Strain="FGSC A4". No introns.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACCTCA AGTCCTTGTT CCGAATCGAA GCCCGACCTC TTCTCCAATT TAGACGCCTC AGCACCACCC GTTCCTCCAA GATGCGCCTT CCCTACGCCC CCTCTGAGCC GCCGACTGCG  GACCCCGAAA CAGCCGAGAT CTACGCCCGC ATCGCCGCCC GCCGGCGCCC TCGACCCCTC ATCCCCCTCG ATCTCTCCCT GCTGCACTCC CCGCCCGTCG CAGACGGCTG GAACAGCTTC  CTTGGTGCCA TTCGTACGCA GACTGTAGTC GACCAGGGCC TCCTTGAACT CGCTGTCTCG AGAGTGGCCG TGATCACGCA AGCCGTATAC GAGTGGAATG CGCATGCCCC GCTAGCTTTG  AAGGGGGGAA TCAAACCGGA GGAATTGCAC GCCGTGCGAA CGCTGCCCTC TACAGCAACC GGAGATGTGG ACGCGGCCGT AAAGGCTCTC GGGCAGAGTG CGTTGACGCC GCAGCAGAGG  GCGATTGTGA GGTACGCGGA CGAAATGACC CAGACGGTCA AAGTGCAAGA CGAGACGTTT GCGCAGTTGC AGAAGGAGGG GTTCTCGGAT CGCGAGATTG TGGAGTTGAC TACGGGGATT 
GCGTGCTACA ACTGTGTGAG CCGGGTACTG GTTGCCTTGG ACGTGGGAGA GAACAATGCG CGAGAGATGA AGAGCGTGGA TGAGCTAGTT GCGGGTTTGA AATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACCTCA AGTCCTTGTT CCGAATCGAA GCCCGACCTC TTCTCCAATT TAGACGCCTC AGCACCACCC GTTCCTCCAA GATGCGCCTT CCCTACGCCC CCTCTGAGCC GCCGACTGCG  GACCCCGAAA CAGCCGAGAT CTACGCCCGC ATCGCCGCCC GCCGGCGCCC TCGACCCCTC ATCCCCCTCG ATCTCTCCCT GCTGCACTCC CCGCCCGTCG CAGACGGCTG GAACAGCTTC  CTTGGTGCCA TTCGTACGCA GACTGTAGTC GACCAGGGCC TCCTTGAACT CGCTGTCTCG AGAGTGGCCG TGATCACGCA AGCCGTATAC GAGTGGAATG CGCATGCCCC GCTAGCTTTG  AAGGGGGGAA TCAAACCGGA GGAATTGCAC GCCGTGCGAA CGCTGCCCTC TACAGCAACC GGAGATGTGG ACGCGGCCGT AAAGGCTCTC GGGCAGAGTG CGTTGACGCC GCAGCAGAGG  GCGATTGTGA GGTACGCGGA CGAAATGACC CAGACGGTCA AAGTGCAAGA CGAGACGTTT GCGCAGTTGC AGAAGGAGGG GTTCTCGGAT CGCGAGATTG TGGAGTTGAC TACGGGGATT 
GCGTGCTACA ACTGTGTGAG CCGGGTACTG GTTGCCTTGG ACGTGGGAGA GAACAATGCG CGAGAGATGA AGAGCGTGGA TGAGCTAGTT GCGGGTTTGA AATGA 

Retrieve as FASTA