Entry information : DgHCMDn (Dgeo_2388)
Entry ID 4682
Creation 2007-02-16 (Filippo Passardi)
Last sequence changes 2007-02-16 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: DgHCMDn (Dgeo_2388)
Name (synonym) DgHCMDn (Dgeo_2388)
Class Hydrolase-CMD fusion (no peroxidase activity)    [Orthogroup: HCMDn001]
Taxonomy Bacteria Deinococcus-Thermus Deinococci Deinococcaceae Deinococcus
Organism Deinococcus geothermalis    [TaxId: 68909 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value DgHCMDn
start..stop
S start..stop
ReHCMDn_H16 296 3e-98 1..382 1..386
RopHCMDn 287 2e-94 17..382 15..385
RmHCMDn 282 1e-92 1..382 1..386
RHsHCMDn_DK17 280 1e-91 17..382 15..385
Literature and cross-references DgHCMDn (Dgeo_2388)
Literature Copeland A. et al. US DOE Joint Genome Institute. Complete sequence of Plasmid 1 of Deinococcus geothermalis DSM 1130. Unpublished.
Protein ref. UniProtKB:   Q1J3W1
DNA ref. GenBank:   CP000358.2 (103793..104953)
Protein sequence: DgHCMDn (Dgeo_2388)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   386
PWM (Da):   %s   41921.95  
PI (pH):   %s   6.24
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTFLDTGSLV LHLQSIGSEA ASPLVFLNPI GSDLRVWDEV AGELRSSFRI IQYDLRGQGL SDVPGGEYSL EHHVADLLGL LDALGLEQVA LVGCSLGGVI AQALALSHPA RVARLVLLDT  LPRIGTAESW QTRIAQVSAE GLPALAPTLI RRWFAPAFFQ EQPTAAHGYT TLLARSPQDG YLGSCAALRD ADLTAQLQTL RIPTLVLCGE HDISTPPDAC RALADQIGAR FALIRGAAHL  PMVERPHEVA RLLRDFLGEK TATGRYDQGM AVRRRVLGDA HVDRANAAVT DLDGDFQTFI TEYAWGGPWS RPGLDLRTRH LLTLAVLTAL LREHELEMHV RATRNTGVTE DDLREVFLQV 
AVYAGVPVAN RAFQIAKRVL SERNDP 

Retrieve as FASTA  
Remarks Complete sequence from Genomic (plasmid 1). Strain="DSM 11300". Member of a small pca-gene cluster: pcaH, pcaG and pcaL.