Entry information : LveCMDn (SKA53_03694)
Entry ID 4717
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: LveCMDn (SKA53_03694)
Name (synonym) LveCMDn (SKA53_03694)
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn002]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Loktanella
Organism Loktanella vestfoldensis    [TaxId: 245188 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LveCMDn
start..stop
S start..stop
PdeCMDn 185 4e-62 1..125 16..140
SagCMDn 178 2e-59 1..122 1..122
CsalHCMDn 124 2e-35 5..117 270..382
ScoHCMDn01 122 8e-35 7..121 254..368
Literature and cross-references LveCMDn (SKA53_03694)
Literature Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A.,
Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and
Venter,J.C. Direct Submission. Submitted (04-JAN-2006)
Protein ref. UniProtKB:   A3V8Q0
DNA ref. GenBank:   AAMS01000009.1 (60814..60434)
Protein sequence: LveCMDn (SKA53_03694)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   126
PWM (Da):   %s   13761.82  
PI (pH):   %s   7.09
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPDRFAQGMA TRRYVLGDAH VDHAEATKSS FDTPFQTMIT EGAWGTLWSD DTISKRERSM LTLSLLAATG NFEEIPMHIR ATANTGASPQ DVLQAFMHVA IYAGVPKANH AIKLAKQTYK 
EMGVEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="SKA53". Note that this sequence is immediately preceded by an hydrolase. However, there is no fusion of the two proteins: a frameshift occurs that overlaps a few base pairs of the end of the hydrolase and the beginning of the carboxymuconolaconte decarboxylase.