Entry information : SwaDCMD
Entry ID 4719
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-09-26 (Christophe Dunand)
Peroxidase information: SwaDCMD
Name SwaDCMD
Class Double CMD (peroxidase activity)    [Orthogroup: DCMD001]
Taxonomy Bacteria Firmicutes Bacilli Staphylococcaceae Staphylococcus
Organism Staphylococcus warneri    [TaxId: 1292 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SwaDCMD
start..stop
S start..stop
OiDCMD 269 2e-92 2..219 4..221
BcoDCMD 141 2e-42 6..218 2..214
BcoDCMD 79 2e-18 4..109 109..214
BUspCMD 78 3e-19 2..110 1..109
BUspCMD 70 5e-16 117..219 7..109
GfoCMD 78 5e-19 117..217 6..106
GfoCMD 74 1e-17 8..111 6..109
Literature and cross-references SwaDCMD
Literature 1.Sashihara,T., Kimura,H., Higuchi,T., Adachi,A., Matsusaki,H., Sonomoto,K. and Ishizaki,A. A novel lantibiotic, nukacin ISK-1, of Staphylococcus warneri ISK-1: cloning of the structural gene and identification of the structure. Biosci. Biotechnol. Biochem. 64 (11), 2420-2428 (2000)

2.Aso,Y., Sashihara,T., Nagao,J., Kanemasa,Y., Koga,H., Hashimoto,T., Higuchi,T., Adachi,A., Nomiyama,H., Ishizaki,A., Nakayama,J. and Sonomoto,K.Characterization of a gene cluster of Staphylococcus warneri ISK-1 encoding the biosynthesis of and immunity to the lantibiotic, nukacin ISK-1. Biosci. Biotechnol. Biochem. 68 (8), 1663-1671 (2004)

3.Aso,Y., Koga,H., Sashihara,T., Nagao,J., Kanemasa,Y., Nakayama,J.
and Sonomoto,K. Description of complete DNA sequence of two plasmids from the nukacin ISK-1 producer, Staphylococcus warneri ISK-1. Plasmid 53 (2), 164-178 (2005)
Protein ref. GenPept:   BAD01001 UniProtKB:   Q75V24
DNA ref. GenBank:   AB125341 (12862..13521)
Protein sequence: SwaDCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   219
PWM (Da):   %s   24171.42  
PI (pH):   %s   8.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLQNDSLYKR SHTKRLVEFT KLSHDSFKSF IEFDHQVLSE GHLSKKFKEV ISIAVAHTTG CPHCIDHHVK QFKKLGGTKE EMAESIMVAT ALKAGSAMAH SVNTLNAYDE IEDDELYKAS 
YFKRLKELGQ LDGERFKAFI NFDQQAMKAG LLTVKEKELI AIAVAHTTGC PYCIDIHTKS AKKAKVTKEE VAEAILVATL LKAGSAMSHG VNALNAYDE 

Retrieve as FASTA  
Remarks Complete sequence from Genomic (Plasmid="pPI-1"). Strain="ISK-1".