Entry information : BjaDCMDn
Entry ID 4722
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-02-22 (Christophe Dunand)
Peroxidase information: BjaDCMDn
Name BjaDCMDn
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Bradyrhizobium
Organism Bradyrhizobium japonicum    [TaxId: 375 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BjaDCMDn
start..stop
S start..stop
SmeDCMDn 305 1e-105 43..266 22..245
SmeDCMDn 90 1e-21 167..266 19..118
RleDCMDn 290 3e-99 2..266 7..273
PstDCMDn 271 7e-92 14..266 13..259
AvDCMDn 270 4e-91 46..266 87..307
Literature and cross-references BjaDCMDn
Literature Kaneko,T., Nakamura,Y., Sato,S., Minamisawa,K., Uchiumi,T.,
Sasamoto,S., Watanabe,A., Idesawa,K., Iriguchi,M., Kawashima,K.,
Kohara,M., Matsumoto,M., Shimpo,S., Tsuruoka,H., Wada,T., Yamada,M.
and Tabata,S.

Complete genomic sequence of nitrogen-fixing symbiotic bacterium
Bradyrhizobium japonicum USDA110

DNA Res. 9 (6), 189-197 (2002)
Protein ref. GenPept:   BAC49865 UniProtKB:   Q89LE4
DNA ref. GenBank:   BA000040 (5091895..5092701)
Protein sequence: BjaDCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   268 (241)
PWM (Da):   %s   29061.13 (26135.5)  
PI (pH):   %s   6.28 (4.88) Peptide Signal:   %s   cut: 28 range:28-268
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MYRKSIMKPQ AAVVALLALT AMPLARTEET AAMTGSSPVL TYEDVRKVAP ALEAYTQNRL LGDVWKRPGL APRDRSIVTL AALIARNQTI EMPYHFNLAL DNGVKPREIS EIITHLAFYA  GWANAMSAVA VAEDVFAARD IGAAQLPVVS VTPLPLDEAA EAQRAAFVQD QFGASFPGVV QYTTDVLFRD LWLRPDLAPR DRSLVTVSAL IANGQMAQLT PHLNRAMDNG LTQTEASEAI 
TQLAFYVGWP NVFSAMPVAK DVFAKRPH 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="USDA 110".