Entry information : BUspDCMDn
Entry ID 4727
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: BUspDCMDn
Name BUspDCMDn
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn002]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia sp.    [TaxId: 36773 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BUspDCMDn
start..stop
S start..stop
AcrDCMDn 200 2e-64 4..246 7..248
AcrDCMDn 93 5e-23 129..241 3..115
OiDCMD 52 0.00000002 17..235 14..209
HhCMD 47 0.0000002 30..112 24..98
HhCMD 46 0.0000005 148..245 9..102
BUspCMD 42 0.00001 30..107 23..98
Literature and cross-references BUspDCMDn
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of chromosome 3 of Burkholderia sp. 383. Unpublished. Submitted (11-OCT-2005)
Protein ref. GenBank:   ABB06184.1 UniProtKB:   Q39MY2
DNA ref. GenBank:   CP000150 (716102..716842)
Protein sequence: BUspDCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   246
PWM (Da):   %s   26852.59  
PI (pH):   %s   5.78
Sequence
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Send to Peroxiscan
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MTDKSALKAE FERLHGYWSD VHDQALAEDP VFFNDYLVMA RAALDAGHLE PKLCDLVMIA ASASVTHLNG DAVALHIQGA LRHGATRREI AEALQISSVL GIHSYMVGVP VLFEEIEANG  QSVDTAFPLD EKFEQVKSAF TASRGYWSDQ LTSMVRSSPA FFDGYTAFSS TPWREGTLAP VVKELLYVAI DVSTTHMFEP GVRIHTRNAL RYGATPAQVL QVMQIVSCLG MQSFLLGVPP 
LRRAAA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo III). Strain="383".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAGACA AATCAGCGCT CAAGGCCGAG TTCGAACGAC TACACGGCTA CTGGAGCGAC GTGCACGACC AGGCGCTCGC AGAGGATCCC GTCTTCTTCA ACGATTACCT CGTGATGGCC  CGCGCCGCAC TGGATGCCGG CCATCTCGAG CCCAAACTTT GCGATCTCGT CATGATCGCG GCGAGCGCGA GCGTCACGCA CCTGAACGGC GACGCGGTTG CGCTGCACAT CCAGGGCGCG  CTGCGTCACG GCGCGACGCG CCGGGAAATC GCGGAGGCCT TGCAGATCTC GTCGGTGCTC GGCATTCACT CGTACATGGT CGGCGTACCC GTGCTGTTCG AAGAAATCGA GGCAAACGGG  CAGTCGGTCG ATACGGCATT TCCGCTCGAC GAGAAATTCG AGCAGGTCAA ATCGGCGTTC ACTGCCAGCC GGGGCTACTG GAGCGATCAA CTGACGTCGA TGGTCCGCAG CTCGCCGGCG  TTTTTCGACG GCTATACCGC GTTCTCGTCC ACGCCCTGGC GCGAGGGCAC GCTGGCGCCC GTCGTCAAGG AACTGCTGTA TGTGGCGATC GACGTATCGA CCACCCACAT GTTCGAGCCG  GGCGTGCGCA TTCATACGCG CAATGCGCTG CGTTACGGCG CGACACCGGC GCAGGTGCTC CAGGTCATGC AGATCGTCAG TTGCCTCGGC ATGCAGAGTT TCCTGCTCGG CGTTCCGCCG 
CTGCGGCGCG CTGCGGCG 

Retrieve as FASTA  
CDS
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ATGACAGACA AATCAGCGCT CAAGGCCGAG TTCGAACGAC TACACGGCTA CTGGAGCGAC GTGCACGACC AGGCGCTCGC AGAGGATCCC GTCTTCTTCA ACGATTACCT CGTGATGGCC  CGCGCCGCAC TGGATGCCGG CCATCTCGAG CCCAAACTTT GCGATCTCGT CATGATCGCG GCGAGCGCGA GCGTCACGCA CCTGAACGGC GACGCGGTTG CGCTGCACAT CCAGGGCGCG  CTGCGTCACG GCGCGACGCG CCGGGAAATC GCGGAGGCCT TGCAGATCTC GTCGGTGCTC GGCATTCACT CGTACATGGT CGGCGTACCC GTGCTGTTCG AAGAAATCGA GGCAAACGGG  CAGTCGGTCG ATACGGCATT TCCGCTCGAC GAGAAATTCG AGCAGGTCAA ATCGGCGTTC ACTGCCAGCC GGGGCTACTG GAGCGATCAA CTGACGTCGA TGGTCCGCAG CTCGCCGGCG  TTTTTCGACG GCTATACCGC GTTCTCGTCC ACGCCCTGGC GCGAGGGCAC GCTGGCGCCC GTCGTCAAGG AACTGCTGTA TGTGGCGATC GACGTATCGA CCACCCACAT GTTCGAGCCG  GGCGTGCGCA TTCATACGCG CAATGCGCTG CGTTACGGCG CGACACCGGC GCAGGTGCTC CAGGTCATGC AGATCGTCAG TTGCCTCGGC ATGCAGAGTT TCCTGCTCGG CGTTCCGCCG 
CTGCGGCGCG CTGCGGCG 

Retrieve as FASTA