Entry information : FspDCMDn02
Entry ID 4730
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-09-26 (Christophe Dunand)
Peroxidase information: FspDCMDn02
Name FspDCMDn02
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn001]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Frankiaceae Frankia
Organism Frankia sp.    [TaxId: 1855 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value FspDCMDn02
start..stop
S start..stop
FspDCMDn03 365 1e-128 6..241 36..271
MavpDCMDn 243 4e-81 8..245 2..239
MavpDCMDn 89 2e-21 31..123 164..256
MavpDCMDn 79 6e-18 166..246 21..101
MgiDCMDn 230 5e-76 8..245 11..248
MgiDCMDn 105 1e-27 4..116 144..258
MgiDCMDn 100 7e-26 140..246 5..110
MYspDCMDn_JLS 224 9e-74 8..245 17..254
MYspDCMDn_JLS 105 9e-28 7..116 153..264
MYspDCMDn_JLS 92 2e-22 142..246 13..116
Literature and cross-references FspDCMDn02
Literature Copeland A. et al. US DOE Joint Genome Institute (JGI-PGF)Sequencing of the draft genome and assembly of Frankia sp. EAN1pec Unpublished Submitted (23-JUN-2005)
Protein ref. UniProtKB:   A8L8C9
DNA ref. GenBank:   CP000820 (5025438..5026196)
Protein sequence: FspDCMDn02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   252
PWM (Da):   %s   27947.11  
PI (pH):   %s   5.36
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGNTAAEQCF REVMTVEPPD VATPFEVATR DFVFGEVWRR PGLSRRDRRW VTLTCVAAAD APEPIDAHVY AALNSSDIEL EAMLEFVLHF AVYCGWPKAS HLEGVIVRQW ARIQQEQGRS  VAPWPSLDNG GLGPNDWEQR LERGVKEFID VNLTPAPRPE TPYRHAGILN FVFGHVWQRP GLTRRERRII TVACVAIDDS PMPLKTHVTS ALHSGDLTKV EMDEIVLQFS AYYGFAKGAA 
LGDTVEAAGL PA 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="EAN1pec".