Entry information : LacDCMDn
Entry ID 4732
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-11-05 (Christophe Dunand)
Peroxidase information: LacDCMDn
Name LacDCMDn
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn001]
Taxonomy Bacteria Firmicutes Bacilli Lactobacillaceae Lactobacillus
Organism Lactobacillus acidophilus    [TaxId: 1579 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LacDCMDn
start..stop
S start..stop
MacDCMDn 233 1e-77 11..235 18..247
MEmDCMDn_S2 231 6e-77 11..234 18..246
MbaDCMDn 231 1e-76 1..235 1..247
BtheAlkyPrxn 196 4e-61 12..234 170..396
Literature and cross-references LacDCMDn
Literature Altermann,E., Russell,W.M., Azcarate-Peril,M.A., Barrangou,R.,
Buck,B.L., McAuliffe,O., Souther,N., Dobson,A., Duong,T.,
Callanan,M., Lick,S., Hamrick,A., Cano,R. and Klaenhammer,T.R.

Complete genome sequence of the probiotic lactic acid bacterium
Lactobacillus acidophilus NCFM

Proc. Natl. Acad. Sci. U.S.A. 102 (11), 3906-3912 (2005)
Protein ref. GenPept:   AAV42351 UniProtKB:   Q5FLS3
DNA ref. GenBank:   CP000033 (452165..452896)
Protein sequence: LacDCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   243
PWM (Da):   %s   27252.94  
PI (pH):   %s   4.89
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSIKKSAQNA HATLLEKTDP EALERINHFA FDEVQRDVDL PDRTKMLSTL AYLLGMQGID EYKIMLPVAL DNGVTPVEAK EVLYQSVDYL GLGRVFPFFK ATNDVLLARG VELPLEGQAT  TTMEDRLEKG EETQIRLFGL QMKDFAKKGI INKWLVDNCF GDYYTRKGLS DNDREMITFC YLAAQGGCEP QLLSHAQANI KLGNDKDFLM KVIEQNVPFI GYPRSLNAVR IVNEADQKVN 
GKD 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="NCFM".