Entry information : FspDCMDn03
Entry ID 4739
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: FspDCMDn03
Name FspDCMDn03
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn001]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Frankiaceae Frankia
Organism Frankia sp.    [TaxId: 1855 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value FspDCMDn03
start..stop
S start..stop
FspDCMDn02 371 5e-131 36..278 6..248
MavpDCMDn 252 8e-84 38..294 2..258
MgiDCMDn 241 2e-79 26..296 4..266
MYspDCMDn_JLS 230 3e-75 37..274 13..253
Literature and cross-references FspDCMDn03
Literature Copeland A. et al.US DOE Joint Genome Institute (JGI-PGF).Sequencing of the draft genome and assembly of Frankia sp. EAN1pec. Unpublished. Submitted (23-JUN-2005)
Protein ref. UniProtKB:   A8LA00
DNA ref. GenBank:   CP000820 (1732744..1733670)
Protein sequence: FspDCMDn03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   308
PWM (Da):   %s   33023.42  
PI (pH):   %s   4.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTTEGTAQAG QTGHAGDERD PAQADDERDA GRTGVAERVF REVMATEAPP ALTPFEAAAR DFVFGEVWRR PGLSRRDRRW VTLTCVAAAD APGPIDAHVY AALRSGDIEI AEMLEFVLHF  AVYCGWPKAS HLEGVVGRQW ARVQRERGAE PTGWPPLDVP SFETGDWNAR LEGGRAEFAD VNLMPAPPSD TPYRQAGILG FVFGNVWRRP GLTRRERRII TVACVGIDDS PMPLRTHVDV 
ALRSGDLTSA EMDEIVLQFA VYYGFAKGEA LSDAAAAAVT TVDAVTAATA VTGGEAGTAG SPHLEEKR 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="EAN1pec".