Entry information : SmedAlkyPrxn
Entry ID 4747
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2007-02-23 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-11-30 (Christophe Dunand)
Peroxidase information: SmedAlkyPrxn
Name SmedAlkyPrxn
Class Other alkylhydroperoxidase (no peroxidase activity)    [Orthogroup: AlkyPrxn001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhizobiaceae Sinorhizobium
Organism Sinorhizobium medicae    [TaxId: 110321 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmedAlkyPrxn
start..stop
S start..stop
AvDCMDn 256 2e-83 7..252 58..308
PstDCMDn 228 3e-73 3..254 6..262
SmeDCMDn 223 2e-71 23..253 15..247
RleDCMDn 221 3e-70 1..251 12..273
Literature and cross-references SmedAlkyPrxn
Literature Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Bruce,D., Pitluck,S. and Richardson,P.

US DOE Joint Genome Institute (JGI-PGF)

Sequencing of the draft genome and assembly of Sinorhizobiummedicae WSM419

Unpublished

Submitted (24-AUG-2006)
Protein ref. GenPept:   EAU04082 UniProtKB_Uniparc:   Q0M972
DNA ref. GenBank:   AATG01000009 (223473..224663)
Protein sequence: SmedAlkyPrxn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   396 (376)
PWM (Da):   %s   41826.51 (39880.5)  
PI (pH):   %s   5.6 (5.60) Peptide Signal:   %s   cut: 21 range:21-396
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKYIAASIAI SALAATAVEA QEERRKIAPP AVYDVAPGLG HFTDDVLFGE VWERTELPSR DRSLVTLSAI VSTGKTAQIG AHVSRALDNG VKPGEIGELI THLAFYSGWP NAISAVTETK  KVFDERQIAP VKNSEAARIE LEAAAEAARS ETVSTTVAPT AAALADLTNR VLFGDLWQRP DLSARDRSLV TIAALIAVGQ PEQLPFHANR AMDSGLTPSE ASEVLAHVAF YAGWPRAMSA  VPVLKQVLNN RQGTQVSASQ ADLKITPAGI GSASAPEEYF TGTVQISGRY QADAPARIGG ATVSFSAGAR TAWHTHPLGQ TLFIVSGRGL VQKEGEAVQE VGSGDVVWIP PLIRHWHGAS 
STGPMTHFAV AEALDGSSVT WMEKVSDEDY GKGVRE 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Fusion protein: CMDn-CMDn-cupin. Strain="WSM419".