Entry information : EvAlkyPrxn
Entry ID 4755
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: EvAlkyPrxn
Name EvAlkyPrxn
Class Other alkylhydroperoxidase (no peroxidase activity)     [Orthogroup: AlkyPrxn001]*
Taxonomy Bacteria Firmicutes Clostridia Eubacteriaceae Eubacterium
Organism Eubacterium ventriosum    [TaxId: 39496 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EvAlkyPrxn
start..stop
S start..stop
RobAlkyPrxn 482 1e-175 1..255 1..255
BfrAlkyPrxn_ATCC25285 362 7e-128 3..255 25..277
BfrAlkyPrxn_YCH46 340 4e-119 3..254 22..270
MpeAlkyPrxn 278 4e-95 6..254 6..246
Literature and cross-references EvAlkyPrxn
Literature Sudarsanam,P. et al., Draft genome sequence of Eubacterium ventriosum (ATCC 27560). Unpublished
Protein ref. GenBank:   WP_005360380.1
DNA ref. GenBank:   NZ_DS264270.1 (167806..168570)
Protein sequence: EvAlkyPrxn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   255
PWM (Da):   %s   28123.68  
PI (pH):   %s   4.88
Sequence
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Send to Peroxiscan
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MAKIVQTAGR NALGEFAPEF AHFNDDVLFG ENWNNQDIDV KTRSIITVVA LMSQGITDSS LKFHLQNAKD HGVTQKEIAA IITHVAFYAG WPKAWAVFNL SKEVWGVNEG DLPYEDAAMR  AHAKEMPFPI GQPNDGFAQY FSGKSFLAPV STDQVGIFNV TFEPGCRNNW HIHHAKNGGG QILVCVAGRG YYQEEGKEAI EMKPGDCINI PPEVKHWHGA APDSWFSHLA VEVPGEEISN 
EWCEPVSDEE YGKLK 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 27560". Architecture: CMDn-Cupin fusion protein. Very similar sequence in contig 9.1 (NZ_AAVL01000018: 106'640 to ~107'450), however it lacks a start codon (pseudogene?).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGA TTGTACAGAC AGCAGGAAGA AATGCTTTAG GAGAATTTGC TCCTGAATTT GCACATTTTA ATGATGATGT TCTTTTCGGA GAAAATTGGA ATAATCAGGA TATAGATGTT  AAAACAAGAA GTATAATTAC AGTAGTTGCC CTTATGTCAC AGGGAATCAC AGATTCATCT TTAAAATTTC ATTTGCAGAA TGCAAAAGAC CACGGTGTAA CACAGAAGGA AATTGCAGCA  ATTATTACTC ATGTTGCATT TTATGCAGGT TGGCCAAAAG CTTGGGCAGT ATTTAATTTG TCAAAAGAAG TATGGGGAGT AAACGAAGGT GATTTACCAT ATGAAGACGC AGCAATGAGA  GCACATGCAA AGGAAATGCC ATTTCCAATT GGACAGCCTA ATGACGGTTT TGCCCAGTAT TTCAGTGGCA AGAGTTTCCT TGCACCAGTT TCAACAGACC AGGTTGGAAT CTTTAATGTA  ACATTTGAAC CGGGTTGCAG AAATAACTGG CATATTCATC ACGCAAAAAA TGGTGGTGGA CAGATTCTTG TATGCGTAGC AGGTCGTGGA TACTATCAAG AAGAAGGCAA GGAAGCAATT  GAAATGAAAC CGGGTGATTG CATTAACATT CCACCGGAAG TAAAACATTG GCATGGTGCA GCACCTGACA GTTGGTTCAG CCATCTTGCA GTTGAAGTAC CGGGTGAAGA AATATCAAAT 
GAATGGTGTG AGCCTGTATC AGATGAAGAA TATGGAAAAT TAAAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGA TTGTACAGAC AGCAGGAAGA AATGCTTTAG GAGAATTTGC TCCTGAATTT GCACATTTTA ATGATGATGT TCTTTTCGGA GAAAATTGGA ATAATCAGGA TATAGATGTT  AAAACAAGAA GTATAATTAC AGTAGTTGCC CTTATGTCAC AGGGAATCAC AGATTCATCT TTAAAATTTC ATTTGCAGAA TGCAAAAGAC CACGGTGTAA CACAGAAGGA AATTGCAGCA  ATTATTACTC ATGTTGCATT TTATGCAGGT TGGCCAAAAG CTTGGGCAGT ATTTAATTTG TCAAAAGAAG TATGGGGAGT AAACGAAGGT GATTTACCAT ATGAAGACGC AGCAATGAGA  GCACATGCAA AGGAAATGCC ATTTCCAATT GGACAGCCTA ATGACGGTTT TGCCCAGTAT TTCAGTGGCA AGAGTTTCCT TGCACCAGTT TCAACAGACC AGGTTGGAAT CTTTAATGTA  ACATTTGAAC CGGGTTGCAG AAATAACTGG CATATTCATC ACGCAAAAAA TGGTGGTGGA CAGATTCTTG TATGCGTAGC AGGTCGTGGA TACTATCAAG AAGAAGGCAA GGAAGCAATT  GAAATGAAAC CGGGTGATTG CATTAACATT CCACCGGAAG TAAAACATTG GCATGGTGCA GCACCTGACA GTTGGTTCAG CCATCTTGCA GTTGAAGTAC CGGGTGAAGA AATATCAAAT 
GAATGGTGTG AGCCTGTATC AGATGAAGAA TATGGAAAAT TAAAA 

Retrieve as FASTA