Entry information : PItoCMD
Entry ID 4766
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: PItoCMD
Name PItoCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Archaea Euryarchaeota Thermoplasmata Picrophilaceae Picrophilus
Organism Picrophilus torridus    [TaxId: 82076 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PItoCMD
start..stop
S start..stop
FacCMD01 138 3e-44 1..111 1..111
FacCMD02 135 5e-43 1..111 1..111
TacCMD 92 5e-26 1..111 1..111
PatCMD 77 7e-20 22..109 22..112
Literature and cross-references PItoCMD
Literature Futterer,O. et al., Genome sequence of Picrophilus torridus and its implications for
life around pH 0. Proc. Natl. Acad. Sci. U.S.A. 101, 9091-9096 (2004)
Protein ref. GenBank:   AAT43654.1 UniProtKB:   Q6L048
DNA ref. GenBank:   AE017261 (1080355..1080690)
Protein sequence: PItoCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   111
PWM (Da):   %s   11932.96  
PI (pH):   %s   5.08
Sequence
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Send to Peroxiscan
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MDAKKKLEEV TRVMNAIGSD DSKVQSSFIG FMSYVMSPGS LDAKTKNLIA ISLSIAAKCD WCVSYHVNNA LKAGATKDEI MEAAYIAVLM FGSPAMMEIN RVLDTLEQLG K 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828".
DNA
Send to BLAST
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ATGGACGCAA AGAAGAAGCT TGAAGAGGTA ACAAGGGTTA TGAACGCCAT TGGCTCTGAC GATTCAAAGG TTCAATCATC ATTTATAGGA TTTATGTCCT ATGTAATGTC CCCAGGGTCA  CTTGATGCAA AAACAAAGAA CCTAATTGCA ATATCATTAT CAATAGCGGC AAAATGCGAC TGGTGTGTTT CATATCATGT TAATAACGCA CTAAAGGCAG GTGCCACAAA GGATGAGATC 
ATGGAGGCTG CATACATAGC GGTTTTAATG TTTGGAAGTC CTGCAATGAT GGAGATAAAT AGAGTTCTTG ATACACTTGA ACAGTTAGGA AAATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGAAGAAGCT TGAAGAGGTA ACAAGGGTTA TGAACGCCAT TGGCTCTGAC GATTCAAAGG TTCAATCATC ATTTATAGGA TTTATGTCCT ATGTAATGTC CCCAGGGTCA  CTTGATGCAA AAACAAAGAA CCTAATTGCA ATATCATTAT CAATAGCGGC AAAATGCGAC TGGTGTGTTT CATATCATGT TAATAACGCA CTAAAGGCAG GTGCCACAAA GGATGAGATC 
ATGGAGGCTG CATACATAGC GGTTTTAATG TTTGGAAGTC CTGCAATGAT GGAGATAAAT AGAGTTCTTG ATACACTTGA ACAGTTAGGA AAATGA 

Retrieve as FASTA