Entry information : MbaCMD
Entry ID 4767
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: MbaCMD
Name MbaCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Archaea Euryarchaeota Methanomicrobia Methanosarcinaceae Methanosarcina
Organism Methanosarcina barkeri    [TaxId: 2208 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MbaCMD
start..stop
S start..stop
MacCMD01 170 1e-56 1..101 1..101
BUspCMD 68 1e-16 4..99 18..109
NwCMD 69 1e-16 4..97 18..107
PatCMD 68 2e-16 8..85 24..101
Literature and cross-references MbaCMD
Literature Copeland A. et al., Complete sequence of chromosome 1 of Methanosarcina barkeri str.
fusaro. Unpublished

Protein ref. GenBank:   AAZ70662.1 UniProtKB:   Q46BT0
DNA ref. GenBank:   CP000099 (2113699..2114040)
Protein sequence: MbaCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   113
PWM (Da):   %s   12643.06  
PI (pH):   %s   4.46
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSFLDEMLPE TAEAFGQMRN SIFKDGYLDL KTKELIAIAS SVLMRCQFCV DTHSQRAIAA GATKEEIAET ISVAMFVAAG TQIGWTNIYR ENIYDKIFEK DKREEDCCCC CKD 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1). Strain="Fusaro / DSM 804".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCATTTT TGGATGAAAT GTTACCTGAA ACTGCGGAAG CTTTTGGACA AATGAGAAAT TCCATATTCA AAGATGGTTA TCTGGATCTT AAAACCAAAG AACTTATAGC CATTGCCTCC  TCTGTCCTTA TGCGTTGTCA GTTTTGCGTT GATACACATT CGCAAAGAGC GATTGCTGCA GGAGCTACAA AGGAGGAAAT TGCCGAAACG ATTTCAGTCG CTATGTTTGT TGCTGCAGGC 
ACACAGATAG GGTGGACAAA CATATACAGG GAAAATATAT ACGACAAAAT CTTTGAAAAG GATAAGAGAG AAGAAGACTG TTGTTGCTGC TGTAAGGACT AA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCATTTT TGGATGAAAT GTTACCTGAA ACTGCGGAAG CTTTTGGACA AATGAGAAAT TCCATATTCA AAGATGGTTA TCTGGATCTT AAAACCAAAG AACTTATAGC CATTGCCTCC  TCTGTCCTTA TGCGTTGTCA GTTTTGCGTT GATACACATT CGCAAAGAGC GATTGCTGCA GGAGCTACAA AGGAGGAAAT TGCCGAAACG ATTTCAGTCG CTATGTTTGT TGCTGCAGGC 
ACACAGATAG GGTGGACAAA CATATACAGG GAAAATATAT ACGACAAAAT CTTTGAAAAG GATAAGAGAG AAGAAGACTG TTGTTGCTGC TGTAAGGACT AA 

Retrieve as FASTA