Entry information : MacCMD03
Entry ID 4776
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-25 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: MacCMD03
Name MacCMD03
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Archaea Euryarchaeota Methanomicrobia Methanosarcinaceae Methanosarcina
Organism Methanosarcina acetivorans    [TaxId: 2214 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MacCMD03
start..stop
S start..stop
MacCMD02 200 9e-69 1..109 1..109
HhCMD 85 5e-23 6..107 11..111
PatCMD 82 1e-21 13..109 19..114
MmazCMD 66 0.000000000000001 7..105 13..111
Literature and cross-references MacCMD03
Literature Galagan J.E. et al., The Genome of M. acetivorans Reveals Extensive Metabolic and
Physiological Diversity Genome Res. 12 (4), 532-542 (2002)
Protein ref. GenBank:   AAM07420.1 UniProtKB:   Q8TIS0
DNA ref. GenBank:   AE010299.1 (4990534..4990863)
Protein sequence: MacCMD03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   109
PWM (Da):   %s   11656.82  
PI (pH):   %s   4.68
Sequence
Send to BLAST
Send to Peroxiscan
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MMDITEMNER MKEMAGELPG VMKTMMGLHS EVVKDGALSA RTKELMMVGI AVALRCEPCL WKHVPEAVNL GATREEILEA VSTAIVMGGG PSVAYGSLVV LKILDEMDI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 35395 / DSM 2834 / JCM 12185 / C2A".
DNA
Send to BLAST
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ATGATGGATA TTACCGAGAT GAACGAAAGG ATGAAAGAAA TGGCCGGGGA ACTCCCGGGT GTGATGAAAA CTATGATGGG GCTTCATTCC GAAGTCGTCA AAGACGGAGC TTTAAGTGCC  CGGACAAAAG AGCTGATGAT GGTAGGGATT GCAGTTGCCC TGCGCTGTGA GCCCTGCCTC TGGAAGCATG TTCCCGAAGC CGTAAACCTT GGAGCGACCC GGGAAGAGAT TCTGGAGGCT 
GTCAGCACTG CAATAGTGAT GGGGGGAGGG CCTTCAGTAG CTTACGGATC ACTGGTTGTC CTCAAAATTC TGGATGAAAT GGATATTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
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ATGATGGATA TTACCGAGAT GAACGAAAGG ATGAAAGAAA TGGCCGGGGA ACTCCCGGGT GTGATGAAAA CTATGATGGG GCTTCATTCC GAAGTCGTCA AAGACGGAGC TTTAAGTGCC  CGGACAAAAG AGCTGATGAT GGTAGGGATT GCAGTTGCCC TGCGCTGTGA GCCCTGCCTC TGGAAGCATG TTCCCGAAGC CGTAAACCTT GGAGCGACCC GGGAAGAGAT TCTGGAGGCT 
GTCAGCACTG CAATAGTGAT GGGGGGAGGG CCTTCAGTAG CTTACGGATC ACTGGTTGTC CTCAAAATTC TGGATGAAAT GGATATTTAA 

Retrieve as FASTA