Entry information : BUspCMD
Entry ID 4777
Creation 2007-02-23 (Filippo Passardi)
Last sequence changes 2016-01-25 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-25 (Christophe Dunand)
Peroxidase information: BUspCMD
Name BUspCMD
Class Carboxymuconolactone decarboxylase (peroxidase activity)    [Orthogroup: CMD001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia sp.    [TaxId: 36773 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BUspCMD
start..stop
S start..stop
NwCMD 162 1e-53 1..107 1..107
CAspCMD 145 7e-47 1..107 18..124
HhCMD 101 1e-29 3..109 4..110
PatCMD 88 3e-24 5..109 8..111
Literature and cross-references BUspCMD
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of chromosome 1 of Burkholderia sp. 383. Unpublished

Protein ref. GenBank:   ABB07477.1 UniProtKB:   Q39J89
DNA ref. GenBank:   CP000151.1 (796326..796655)
Protein sequence: BUspCMD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   109
PWM (Da):   %s   11157.85  
PI (pH):   %s   7.51
Sequence
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Send to Peroxiscan
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MLNWNEYRKE LSTRIGEIAK LSPDTLAGYK ALSGAGAKTG HLDAKTRELI ALAVAVTTRC DGCIAVHTAE AAKHGATKEE VAEALGVAIA LNAGAALVYS ARVMDALGE 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1). Strain="ATCC 17760 / NCIMB 9086 / R18194".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTGAACT GGAACGAATA CCGGAAGGAA CTCTCGACGC GCATCGGCGA GATCGCCAAG CTGTCGCCCG ATACGCTGGC CGGCTACAAG GCGCTGTCGG GCGCCGGTGC CAAGACGGGC  CATCTCGACG CGAAGACGCG CGAACTGATC GCGCTCGCGG TCGCCGTCAC GACGCGCTGC GACGGCTGTA TCGCCGTGCA CACCGCGGAA GCGGCCAAGC ATGGCGCGAC CAAAGAGGAA 
GTGGCGGAAG CGCTCGGCGT GGCAATTGCA CTGAACGCGG GTGCGGCGCT TGTCTATTCG GCACGCGTGA TGGACGCGCT CGGCGAGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTGAACT GGAACGAATA CCGGAAGGAA CTCTCGACGC GCATCGGCGA GATCGCCAAG CTGTCGCCCG ATACGCTGGC CGGCTACAAG GCGCTGTCGG GCGCCGGTGC CAAGACGGGC  CATCTCGACG CGAAGACGCG CGAACTGATC GCGCTCGCGG TCGCCGTCAC GACGCGCTGC GACGGCTGTA TCGCCGTGCA CACCGCGGAA GCGGCCAAGC ATGGCGCGAC CAAAGAGGAA 
GTGGCGGAAG CGCTCGGCGT GGCAATTGCA CTGAACGCGG GTGCGGCGCT TGTCTATTCG GCACGCGTGA TGGACGCGCT CGGCGAGTGA 

Retrieve as FASTA