Entry information : BcAhpC_AMMD (Bamb_3501)
Entry ID 4877
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2007-03-04 (Nicolas Rouhier)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-03-31 (Christophe Dunand)
Peroxidase information: BcAhpC_AMMD (Bamb_3501)
Name (synonym) BcAhpC_AMMD (Bamb_3501)
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia cepacia    [TaxId: 292 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BcAhpC_AMMD
start..stop
S start..stop
BamAhpC_MEX-6 388 1e-140 1..187 1..187
BamAhpC_IOP40-10 388 1e-140 1..187 1..187
BamAhpC_MC40-6 389 2e-140 1..187 32..218
BUspAhpC 387 3e-140 1..187 1..187
Literature and cross-references BcAhpC_AMMD (Bamb_3501)
Literature Copeland A. et al. US DOE Joint Genome Institute. Complete sequence of Chromosome 2 of Burkholderia cepacia AMMD.
Protein ref. UniProtKB:   Q0B9W8
DNA ref. GenBank:   CP000441.1 (310942..310379)
Protein sequence: BcAhpC_AMMD (Bamb_3501)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   20630.4  
PI (pH):   %s   4.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPIINTQIKP FKATAYHNGE FVPVTEENFK GKWSVVVFYP ADFTFVCPTE LGDLADRYAE FQKLGVEIYG VSTDTHFTHK AWHDTSDTIG KIKYPMIGDP TLTLSRNFDV LIEEEGMALR 
GTFVINPEGE IKLCEIHDNG IGRDAGELLR KVQAAQYIAA HPGEVCPAKW TPGAETLTPS LDLIGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 2). Strain="ATCC 53795 / AMMD".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCGATCA TCAACACCCA AATCAAGCCG TTCAAGGCAA CCGCATACCA CAACGGCGAA TTCGTGCCCG TGACCGAAGA GAACTTCAAG GGCAAGTGGT CCGTCGTCGT GTTCTACCCG  GCCGACTTCA CGTTCGTCTG CCCGACCGAG CTGGGCGACC TCGCCGACCG CTACGCGGAA TTCCAGAAGC TGGGTGTCGA AATCTACGGC GTGTCGACCG ATACGCACTT CACGCACAAG  GCATGGCACG ACACGTCGGA CACGATCGGC AAGATCAAGT ACCCGATGAT CGGCGACCCG ACGCTCACGC TGTCGCGCAA CTTCGACGTG CTGATCGAGG AAGAAGGGAT GGCCCTGCGC  GGCACGTTCG TGATCAACCC GGAAGGCGAG ATCAAGCTGT GCGAAATCCA CGACAACGGC ATCGGCCGCG ACGCAGGCGA ACTGCTGCGC AAGGTGCAGG CCGCGCAATA CATCGCGGCG 
CACCCGGGTG AAGTGTGCCC GGCCAAGTGG ACGCCGGGTG CGGAAACGCT GACCCCGTCG CTCGACCTGA TCGGCAAGAT CTGA 

Retrieve as FASTA