Entry information : BamAhpC_MC40-6
Entry ID 4879
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2007-03-04 (Nicolas Rouhier)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-03-31 (Christophe Dunand)
Peroxidase information: BamAhpC_MC40-6
Name BamAhpC_MC40-6
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Burkholderia
Organism Burkholderia ambifaria    [TaxId: 152480 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BamAhpC_MC40-6
start..stop
S start..stop
BamAhpC_MEX-6 390 6e-141 32..218 1..187
BamAhpC_IOP40-10 390 6e-141 32..218 1..187
BUspAhpC 389 1e-140 32..218 1..187
BviAhpC 389 2e-140 32..218 1..187
Literature and cross-references BamAhpC_MC40-6
Literature Copeland A. et al. Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6.
Protein ref. UniProtKB:   B1Z2L3
DNA ref. GenBank:   CP001026.1 (987677..987114)
Protein sequence: BamAhpC_MC40-6
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   218
PWM (Da):   %s   24099.19  
PI (pH):   %s   6.23
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPRIETSNFT NSGSTRILGT LHQHHPKGTR KMPIINTQIK PFKATAYHNG DFVPVTEENF KGKWSVVVFY PADFTFVCPT ELGDLADRYA EFQKLGVEIY GVSTDTHFTH KAWHDTSDTI 
GKIKYPMIGD PTLTLSRNFD VLIEEEGMAL RGTFVINPEG EIKLCEIHDN GIGRDAGELL RKVQAAQYIA AHPGEVCPAK WTPGAETLTP SLDLIGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2). Strain="MC40-6".N-terminal extension?
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCCGATCA TCAACACCCA AATCAAGCCG TTCAAGGCAA CCGCATACCA CAACGGCGAT TTCGTGCCCG TGACCGAAGA GAACTTCAAG GGCAAGTGGT CCGTCGTCGT GTTCTATCCG  GCCGACTTCA CGTTCGTCTG CCCGACCGAG CTGGGCGACC TCGCCGACCG CTACGCGGAA TTCCAGAAGC TGGGTGTCGA AATCTACGGC GTGTCGACCG ATACGCACTT CACGCACAAG  GCATGGCACG ACACGTCGGA CACGATCGGC AAGATCAAGT ACCCGATGAT CGGCGACCCG ACGCTCACGC TGTCGCGCAA CTTCGACGTG CTGATCGAGG AAGAAGGGAT GGCGCTGCGC  GGCACGTTCG TGATCAACCC GGAAGGCGAG ATCAAGCTGT GCGAAATCCA CGACAACGGC ATCGGCCGCG ACGCAGGCGA ACTGCTGCGC AAGGTGCAGG CTGCGCAATA CATCGCGGCG 
CACCCGGGTG AAGTGTGCCC GGCCAAGTGG ACGCCGGGTG CGGAAACGCT GACCCCGTCG CTCGACCTGA TCGGCAAGAT CTGA 

Retrieve as FASTA