Entry information : GmPrx19 (Glyma15g13560.1)
Entry ID 488
Creation 2007-02-02 (Christophe Dunand)
Last sequence changes 2007-02-02
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx19 (Glyma15g13560.1)
Name (synonym) GmPrx19 (Glyma15g13560.1)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Germinating shoots
Hypocotyls
Immature pods
Leaves
Roots
Inducers Auxin treatment
Cyst nematode infection
Pathogen interaction
Phytophthora infection
Wounding
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx19
start..stop
S start..stop
PvPrx08 612 0 13..358 7..355
GmPrx260 540 0 30..358 21..349
GmPrx69 540 0 30..358 20..347
MsPrx15 533 0 18..357 11..352
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10154141..10154377 237 N° 2 10154659..10154850 192 N° 3 10157193..10157358 166 N° 4 10157643..10158124 482
join(10154141..10154377,10154659..10154850,10157193..10157358,10157643..10158124 )


exon

Literature and cross-references GmPrx19 (Glyma15g13560.1)
Literature Tyler,B. Not Published. Public Soybean EST Project.
DNA ref. Phytozome 11:   Gm15 (10154141..10158124)
Protein sequence: GmPrx19 (Glyma15g13560.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358
PWM (Da):   %s   38953.66 Transmb domain:   %s   i12-29o
PI (pH):   %s   7.69
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLMIQNRKKMRFFTVKVALCCVVVMLLTLSDAQLDNSFYKDTCPRVHSIVREVVRNVSKSDPRILASLIRLHFHDCFVQGCDASILLNDTATIVSEQSAPPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAEISSVLAHGPDWKVPLGRRDSLNSSFSLALQNLPGFNFTLDQLKSTFDRQGLNTTDLVALSGAHTIGRSQCRFFAHRIYNFSGNGNSDPTLNTTLSQALRAICPNGGPGTNLTNLDLTTPDRFDSNYYSNLQLQNGLLRSDQVLFSTSGAETIAIVNSFGSNQTLFYEHFKVSMIKMSIIEVLTGSQGEIRKHCNFVNGDSSNLATLATKKSSEDGMVSSI

Retrieve as FASTA  
Remarks Complete sequence from genomic and 22 EST. Germinating shoot from 3 day old seedling.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTGATGATTCAAAACAGAAAAAAAATGAGGTTTTTTACAGTGAAAGTAGCTCTGTGCTGTGTGGTGGTTATGCTACTAACCCTCTCAGATGCACAGCTAGATAACTCTTTTTACAAG
GACACGTGTCCAAGAGTGCATTCTATTGTGCGTGAAGTTGTCAGAAATGTTTCCAAATCTGATCCCCGCATTCTTGCCAGTCTCATAAGGCTCCACTTTCATGATTGTTTCGTTCAA
GTA
TGTAGTATTAGTTCTTAATTGCTATTACTTGTCTTAATCTAAGTTTATACTCCTTAACACAACTCAATAGCCAAACACTAGAATGTTTGTTATTTTTGCTGTCACCGTCCTCTTACCTGT
ACTTTTTCATTTACGATATCTAGAGAACTTATCTGAAAAAATCAAACTCAATTTCAGTTGAACTAAGGACTTGTTGCTAGATTGAAATGTTATTACTTATCAAGTTTTATGCTTTTAGAT
AATTGAAATTAATGTTACTATACATATGTACATGACAGGGGTGTGATGCATCAATTCTGTTGAACGACACAGCTACGATCGTGAGCGAGCAAAGTGCACCACCAAATAACAACTCAATAA
GAGGTTTGGATGTTGTGAACCAGATCAAAACCGCGGTGGAAAATGCTTGCCCAGGCATAGTTTCTTGCGCTGATATCCTTGCTCTTGCAGCTGAGATATCTTCTGTTCTG
GTATGTATAT
GCCATGTCTCATATTCCTATATTCAGTGTATTAATTAATTTCTTGTCGAGTGTTAATGGATATCCACCTAAAACCTAATCAAGCTGATATATATAGGTAAAATAGTGTATAAGTGGATAT
AACTTTTTGAGACTTAAACAATTCTAAATTATCCAAGTAGGATCACTTATTATAGTGATTGGGTCATCGTCAAACTATAAATAAATGTTTTGTCTCGCAAATTTTACATTCTCTCAGGAG
ATATACTGAAAGATCTGATATTTGTTAATGATATAACTAAAATAATACTCCCTTTAGACCAAAGCAATTGTTGTTTAAAATTAATGCACACAATTTTAAAAAAATATTACTCACAAACTA
TATATTTAATCTAAAATACTTCATTTAACATCACGAGAATAATATCATCGAATAGATTATAATTATTTAAATCATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAA
AATAATTAATGAGACTTAGCATATGTAAAACATCAATCATTTTGAAATAAAAAATAAATAAACAATTAAAATATCTATAGTTTTGAAATATAGGGAGCAGCCTTCACCTCATTAACTAAT
TTTGGTTGAGGTAGGTAAGAAGAACTATAATTGTAAAAGTGTTGAACTGATTAATGTTAGCTATCTCCCGACGGTAAGTGTGGTTGTGTACTTATTGTAAAAAATTTAATGATTCCGCAC
AATAATGAATTTTAGTCACGCCAAATACTTGCACACATGCAATAAAATAAATATCTTTTCATAGACAAAAAATATGCCTCTTGCATCGATATGAACAGAAAAAACTTTTACCCCTGTTCA
AGTCCCATCGCAAAGGATTACCCAGTTCCAGGTAGGTGTTGGTGACCATGCATGGTAGCAGGAAGGAAGCTTCCGGGTACTTATAATGGTACTAAAAGCTCACACGTCAATAATCAATTA
TTATACCAAAAATAAAGTAAGTCCATGACATGAAGGACCTTTTTTAACAAATTGGCAGGCCTTCCTTTAAATGTACTAGCAATCATATCTCATACAGTATATTACACGAATATTCATAAC
TATGTCTAAAATATATATTTTAAGGGAAAATATTAAAAATAATTATTTAAAAATAAATTAAAATATAAATATAAGTATTGCAATTTTTAATTTTGAAAGTAAGGGAAATCAATTTAATTA
TAGATTATATTTGTTTTGAATTTTAAAAAATGACTATATAATATAATTGTTTTAGAGTTTTTTTCATAAACTATTATATTTAAGAGTAATGATACACGTATACCATTTATTTTAAATATA
TTGCCCACATCTTTCATTTTTTTTATATCTCTCTTCATGTCATAAATTTTATTTTATTTATATTTTTTTTTCAATTTTCTCTTTTTCTAGATGGTGTTCATCAAACATTTTTTAATATTT
AACTTGTAAAAAAAGTACCAAAAACATTTGTTAGGTTTTTTCTTTTTCTAAAAAAATTACATAATAATTGTATTTTAAAAAAAATAACTGAAGGAAATAAACGCATCCAGATCTTAAATA
TCTCATTGTATTTAATATTATTTAAAAAAATTGAATATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTATCTCACTCCAAAAAATAAGTATTAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCTT
TTTTACCGACTCAATGGTGGTGGGATTTGGTCAAAACAAACCTACTTAATATGTTGGGAAGGAGAATCCAACGAAACATGTCCCATGCGATGGCGATAAGATACTCACTTACCCAGATAA
TATCATTTTGATTTGGGCTGAGGTATTAACTGGCCTTTGAGTGATAGGATTGTTTACCCTAAAGCCCAAGTCTAAAGCCCAATCGGGAAGACTTTTTCAGTTTTCAATATATTTTTCCAT
TTTGAGGAGAAAAATCTTCTTAAGCTCTTTAGTAATAAATAAATAAACAAGTTTAGGAATATCTGTGTTTTGTTTTAATTCTATTGGACTATTTTAAAATTTTGAAGATTTCTTAAATTA
GTGTTAAGTAAATAATCTCGCACATTTATTAATATAGTTTTATAAATTAAGTCAACATTGAATGAATAATAGGTCATTTATAAAATATTGTTTTTTAGAATCACTTGTCATATATTTTTG
TGTGTTGAAAACCTTTCTTTCTTATTTTGTTTGTCTTATTATTACTTATTAGGCTCATGGCCCTGACTGGAAAGTTCCACTAGGAAGAAGAGATAGTTTAAATTCAAGTTTTTCTCTTGC
TCTTCAAAATCTTCCGGGTTTCAATTTCACCCTTGATCAACTCAAATCTACATTTGATAGACAAGGCCTCAATACGACTGATCTAGTTGCTTTGTCAG
GTATGAAAATTTTACATTTCAA
GAAATATCCTTAATAGAATTGATGTTGGTGTACAAGATAAAGTAACTAAAATACAAGTTTTAGGCTCGCCCAAAAAAATATTTCTTTTTAGTTTTTATAAAACAAAAAGATCATATTTGT
TAAAGAAAATATCACATATGTTAAAAAAAATCTAATATTTATTTTTTTCATTTAAAATAAGATATTTCTTTTAAAATTTACTTTAGATCTCACATGCCATCTAGCATTGTCGATGTATCA
CACATATATGTTTCAATTTCAGGTGCTCATACAATTGGTAGATCTCAATGTAGATTTTTTGCTCACCGAATATACAATTTCAGTGGCAATGGCAACAGTGACCCAACTCTCAACACTACC
CTCTCACAAGCACTACGAGCAATATGTCCCAATGGTGGACCTGGAACCAATCTCACCAATTTGGACTTAACTACTCCTGATAGATTTGACTCCAACTACTACTCAAATCTTCAACTTCAA
AATGGCTTGCTTCGGAGTGATCAAGTGTTATTTTCTACAAGTGGTGCAGAGACCATTGCCATTGTCAATAGTTTCGGTAGTAATCAAACTCTTTTCTATGAACATTTTAAGGTGTCAATG
ATAAAAATGAGCATCATTGAAGTGCTAACGGGGTCACAAGGAGAAATTCGAAAACATTGTAACTTTGTCAATGGGGATTCTTCTAATCTGGCTACTCTAGCCACCAAAAAATCTTCAGAG
GATGGTATGGTGAGCTCAATCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTGATGATTCAAAACAGAAAAAAAATGAGGTTTTTTACAGTGAAAGTAGCTCTGTGCTGTGTGGTGGTTATGCTACTAACCCTCTCAGATGCACAGCTAGATAACTCTTTTTACAAG
GACACGTGTCCAAGAGTGCATTCTATTGTGCGTGAAGTTGTCAGAAATGTTTCCAAATCTGATCCCCGCATTCTTGCCAGTCTCATAAGGCTCCACTTTCATGATTGTTTCGTTCAA
GGG
TGTGATGCATCAATTCTGTTGAACGACACAGCTACGATCGTGAGCGAGCAAAGTGCACCACCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATCAAAACCGCGGTGGAA
AATGCTTGCCCAGGCATAGTTTCTTGCGCTGATATCCTTGCTCTTGCAGCTGAGATATCTTCTGTTCTG
GCTCATGGCCCTGACTGGAAAGTTCCACTAGGAAGAAGAGATAGTTTAAAT
TCAAGTTTTTCTCTTGCTCTTCAAAATCTTCCGGGTTTCAATTTCACCCTTGATCAACTCAAATCTACATTTGATAGACAAGGCCTCAATACGACTGATCTAGTTGCTTTGTCAG
GTGCT
CATACAATTGGTAGATCTCAATGTAGATTTTTTGCTCACCGAATATACAATTTCAGTGGCAATGGCAACAGTGACCCAACTCTCAACACTACCCTCTCACAAGCACTACGAGCAATATGT
CCCAATGGTGGACCTGGAACCAATCTCACCAATTTGGACTTAACTACTCCTGATAGATTTGACTCCAACTACTACTCAAATCTTCAACTTCAAAATGGCTTGCTTCGGAGTGATCAAGTG
TTATTTTCTACAAGTGGTGCAGAGACCATTGCCATTGTCAATAGTTTCGGTAGTAATCAAACTCTTTTCTATGAACATTTTAAGGTGTCAATGATAAAAATGAGCATCATTGAAGTGCTA
ACGGGGTCACAAGGAGAAATTCGAAAACATTGTAACTTTGTCAATGGGGATTCTTCTAATCTGGCTACTCTAGCCACCAAAAAATCTTCAGAGGATGGTATGGTGAGCTCAATCTAG

Retrieve as FASTA