Entry information : PnaAhpC
Entry ID 4880
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2016-01-26 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-27 (Christophe Dunand)
Peroxidase information: PnaAhpC
Name PnaAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Comamonadaceae Polaromonas
Organism Polaromonas naphthalenivorans    [TaxId: 216465 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PnaAhpC
start..stop
S start..stop
MpetAhpC 332 2e-118 1..190 1..187
BmuAhpC_ATCC17616 317 2e-112 1..190 1..187
BcenAhpC_HI2424 315 7e-112 1..190 1..187
BviAhpC 315 9e-112 1..190 1..187
Literature and cross-references PnaAhpC
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of Chromosome1 of Polaromonas naphthalenivorans CJ2. Unpublished
Protein ref. GenBank:   ABM37708.1 UniProtKB:   A1VPY0
DNA ref. GenBank:   CP000529.1 (2533623..2534195)
Protein sequence: PnaAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   190
PWM (Da):   %s   20871.43  
PI (pH):   %s   4.91
Sequence
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Send to Peroxiscan
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MSLINTEIIP FKATAYHNGK FVPVSNDDFK GKWSVVVFYP ADFTFVCPTE LGDLADHYPE FQKLGVEVYS VSTDTHFTHK AWHDTSETIA KVTYPMIGDP SGKLTRAFEV MIEEGDDAGL 
AYRGTFVIDP EGKIKTIEVH DNGIGRDAAE LLRRVKAAQY VAAHPGEVCP AKWSEGAETL KPSFDLVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="CJ2".
DNA
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ATGTCCCTGA TCAACACCGA AATCATCCCT TTCAAAGCCA CCGCCTACCA CAACGGCAAG TTTGTACCCG TCAGCAATGA CGACTTCAAG GGCAAATGGT CCGTCGTCGT GTTTTACCCG  GCCGACTTCA CCTTCGTGTG CCCGACCGAA CTCGGCGACC TGGCCGACCA CTACCCTGAA TTCCAGAAGC TGGGTGTCGA GGTGTACAGC GTATCGACCG ATACCCACTT CACCCACAAG  GCCTGGCACG ACACATCCGA GACCATCGCC AAGGTGACCT ACCCGATGAT CGGCGACCCG AGCGGCAAGC TGACGCGCGC TTTCGAAGTC ATGATCGAGG AAGGCGACGA CGCCGGCCTG  GCTTACCGCG GCACCTTCGT CATCGATCCA GAAGGCAAGA TCAAGACCAT TGAAGTGCAC GACAACGGCA TTGGCCGCGA CGCCGCCGAA CTGCTGCGCC GCGTCAAGGC TGCGCAATAT 
GTAGCCGCCC ATCCCGGTGA AGTCTGCCCC GCCAAATGGA GCGAAGGCGC TGAAACGCTC AAGCCTTCGT TCGACCTGGT CGGCAAGATC TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCCTGA TCAACACCGA AATCATCCCT TTCAAAGCCA CCGCCTACCA CAACGGCAAG TTTGTACCCG TCAGCAATGA CGACTTCAAG GGCAAATGGT CCGTCGTCGT GTTTTACCCG  GCCGACTTCA CCTTCGTGTG CCCGACCGAA CTCGGCGACC TGGCCGACCA CTACCCTGAA TTCCAGAAGC TGGGTGTCGA GGTGTACAGC GTATCGACCG ATACCCACTT CACCCACAAG  GCCTGGCACG ACACATCCGA GACCATCGCC AAGGTGACCT ACCCGATGAT CGGCGACCCG AGCGGCAAGC TGACGCGCGC TTTCGAAGTC ATGATCGAGG AAGGCGACGA CGCCGGCCTG  GCTTACCGCG GCACCTTCGT CATCGATCCA GAAGGCAAGA TCAAGACCAT TGAAGTGCAC GACAACGGCA TTGGCCGCGA CGCCGCCGAA CTGCTGCGCC GCGTCAAGGC TGCGCAATAT 
GTAGCCGCCC ATCCCGGTGA AGTCTGCCCC GCCAAATGGA GCGAAGGCGC TGAAACGCTC AAGCCTTCGT TCGACCTGGT CGGCAAGATC TAA 

Retrieve as FASTA