Entry information : PhaAhpC
Entry ID 4895
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2007-03-04 (Nicolas Rouhier)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2009-09-25 (Christophe Dunand)
Peroxidase information: PhaAhpC
Name PhaAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Pseudoalteromonadaceae Pseudoalteromonas
Organism Pseudoalteromonas haloplanktis    [TaxId: 228 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PhaAhpC
start..stop
S start..stop
AbaAhpC 382 3e-138 1..189 1..189
PtuAhpC 344 2e-123 1..189 1..189
SloAhpC 344 3e-123 1..189 1..189
CpsAhpC 341 7e-122 1..189 1..189
Literature and cross-references PhaAhpC
Literature Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C., Rouy Z., show all authors Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125. Genome Res. 15:1325-1335(2005).
Protein ref. UniProtKB:   Q3IDA8
DNA ref. GenBank:   CR954247.1 (310987..311556)
mRNA ref. GenBank:   CAI89306
Protein sequence: PhaAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189
PWM (Da):   %s   20863.21  
PI (pH):   %s   4.39
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTSLINTKL QPFNATAYHN GDFVELSEKD VLGKWSIFFF YPADFTFVCP TELGDMADYY AQLQEMGVEV YSVSTDTHFT HKAWHDTSDT IGKITYPMIG DPTGRITRSF GVMIEEEGLA 
LRGTFVMNPE GEIKIIETHD LGIGRSAKEL VRKVQAAQYI ATHDGEVCPA SWQPGEDTLA PSLDLVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2). Strain="TAC 125".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCACTT CATTAATCAA CACAAAATTA CAACCATTCA ATGCAACCGC TTACCACAAC GGCGACTTTG TAGAATTATC TGAAAAAGAC GTACTTGGTA AATGGTCTAT TTTCTTCTTT  TACCCAGCTG ATTTCACTTT TGTATGTCCA ACTGAACTTG GCGACATGGC AGATTATTAC GCACAATTAC AAGAAATGGG CGTAGAAGTT TATTCAGTAT CTACCGATAC TCATTTTACT  CACAAAGCAT GGCACGACAC GTCAGACACA ATAGGTAAAA TTACTTACCC TATGATTGGC GACCCAACAG GGCGTATTAC ACGTAGCTTT GGCGTAATGA TCGAAGAAGA AGGCTTAGCA  CTTCGCGGAA CATTTGTAAT GAACCCAGAA GGCGAAATTA AAATTATCGA AACTCACGAT TTAGGTATTG GCCGTAGCGC TAAAGAACTC GTTCGTAAAG TACAAGCTGC ACAATACATT 
GCAACGCACG ACGGTGAAGT TTGCCCTGCA TCTTGGCAGC CAGGTGAAGA CACACTTGCA CCTTCACTAG ACCTAGTTGG TAAAATCTAA 

Retrieve as FASTA