Entry information : CthAhpC
Entry ID 4911
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2016-01-26 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-27 (Christophe Dunand)
Peroxidase information: CthAhpC
Name CthAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Firmicutes Clostridia Clostridiaceae Clostridium
Organism Clostridium thermocellum    [TaxId: 1515 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CthAhpC
start..stop
S start..stop
CbeAhpC 328 7e-117 1..187 1..187
TaqAhpC 323 3e-115 1..187 1..187
GkaAhpC 322 1e-114 1..187 1..187
GstAhpC 321 4e-114 1..187 1..187
Literature and cross-references CthAhpC
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of Clostridium thermocellum ATCC 27405. Unpublished
Protein ref. GenBank:   ABN53183.1
DNA ref. GenBank:   CP000568.1 (2345038..2345601)
Protein sequence: CthAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   20678.4  
PI (pH):   %s   5.06
Sequence
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Send to Peroxiscan
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MSLIGTEVKP FTAEAYHNGK FITVTEQDFK GKWSIVVFYP ADFTFVCPTE LEDLQNNYEK FKALGAEVYS VSTDTHYTHK AWHDTSEAIK KITYVMIGDP SHTLSRNFDV LNEATGLADR 
GTFIIDPDGV IQYVEVSAEN VGRNAEALID KIKAAQYVRN HPGEVCPAKW KEGGATLKPS IDLVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC 27405".
DNA
Send to BLAST
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ATGTCACTGA TTGGAACTGA AGTAAAACCA TTTACTGCTG AGGCTTATCA CAACGGAAAA TTTATAACGG TAACGGAGCA GGATTTTAAG GGCAAATGGA GCATAGTAGT TTTCTATCCC  GCAGATTTTA CTTTTGTTTG CCCGACCGAG CTTGAAGACC TTCAGAATAA TTATGAAAAA TTTAAAGCAT TAGGAGCAGA AGTTTATTCT GTTTCCACCG ATACCCATTA TACTCACAAA  GCATGGCATG ACACATCCGA AGCTATAAAG AAAATTACTT ATGTAATGAT TGGCGATCCG TCCCATACTC TTTCCAGAAA CTTTGATGTT CTCAATGAAG CAACAGGATT GGCAGACAGA  GGTACCTTTA TTATAGACCC TGACGGTGTT ATTCAATATG TTGAAGTATC AGCTGAAAAT GTCGGACGTA ATGCCGAGGC TCTTATTGAT AAAATAAAGG CTGCACAATA CGTCAGAAAT 
CATCCCGGTG AAGTTTGCCC GGCAAAATGG AAAGAAGGCG GAGCAACGCT TAAACCAAGC ATTGATTTGG TAGGAAAGAT ATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCACTGA TTGGAACTGA AGTAAAACCA TTTACTGCTG AGGCTTATCA CAACGGAAAA TTTATAACGG TAACGGAGCA GGATTTTAAG GGCAAATGGA GCATAGTAGT TTTCTATCCC  GCAGATTTTA CTTTTGTTTG CCCGACCGAG CTTGAAGACC TTCAGAATAA TTATGAAAAA TTTAAAGCAT TAGGAGCAGA AGTTTATTCT GTTTCCACCG ATACCCATTA TACTCACAAA  GCATGGCATG ACACATCCGA AGCTATAAAG AAAATTACTT ATGTAATGAT TGGCGATCCG TCCCATACTC TTTCCAGAAA CTTTGATGTT CTCAATGAAG CAACAGGATT GGCAGACAGA  GGTACCTTTA TTATAGACCC TGACGGTGTT ATTCAATATG TTGAAGTATC AGCTGAAAAT GTCGGACGTA ATGCCGAGGC TCTTATTGAT AAAATAAAGG CTGCACAATA CGTCAGAAAT 
CATCCCGGTG AAGTTTGCCC GGCAAAATGG AAAGAAGGCG GAGCAACGCT TAAACCAAGC ATTGATTTGG TAGGAAAGAT ATAA 

Retrieve as FASTA