Entry information : SalAhpC
Entry ID 4915
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2016-01-26 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-27 (Christophe Dunand)
Peroxidase information: SalAhpC
Name SalAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Sphingomonadaceae Sphingopyxis
Organism Sphingopyxis alaskensis    [TaxId: 117207 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SalAhpC
start..stop
S start..stop
NarAhpC 315 5e-112 1..187 1..187
EsAhpC 306 3e-108 1..187 1..188
SPspAhpC 302 9e-107 1..187 1..187
ElAhpC 302 1e-106 1..187 1..188
Literature and cross-references SalAhpC
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of chromosome of Sphingopyxis alaskensis RB2256. Unpublished

Protein ref. GenBank:   ABF52350.1 UniProtKB:   Q1GVH2
DNA ref. GenBank:   CP000356.1 (639690..640253)
Protein sequence: SalAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   20213.09  
PI (pH):   %s   4.84
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGIIGSSIKP FSATSYHQGK FVPVTDADVK GKWAVFFFYP ADFTFVCPTE LEDLADQYET LQSLGVEVYA VSTDTHFSHK AWHDSSPAIG KIAYHMLGDQ NHVLANNFGV LREDSGLADR 
ATFVVDPDGV IQVMEITCEG VGRNAGELVR KIKAAIHVRA NPGQVCPAKW EEGAETLAPS IELVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="RB2256".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTATCA TCGGAAGTTC GATCAAGCCG TTCAGCGCCA CCTCTTACCA TCAGGGCAAG TTCGTCCCCG TGACGGACGC CGATGTGAAG GGCAAATGGG CGGTGTTCTT CTTCTATCCG  GCCGACTTCA CCTTCGTCTG CCCGACCGAG CTCGAAGACC TCGCCGACCA GTATGAAACG CTCCAGAGCC TTGGCGTCGA AGTCTATGCC GTTTCGACCG ACACGCATTT CAGCCACAAG  GCTTGGCACG ACAGTTCACC GGCGATCGGC AAGATCGCCT ATCACATGCT GGGTGACCAG AACCATGTCC TCGCCAATAA TTTCGGCGTG CTGCGCGAAG ATTCGGGCCT TGCCGACCGC  GCGACCTTCG TTGTCGATCC CGACGGAGTG ATTCAGGTGA TGGAAATCAC CTGCGAAGGC GTCGGCCGCA ATGCAGGGGA ACTGGTCCGC AAGATCAAGG CTGCGATCCA TGTCCGCGCC 
AACCCCGGCC AGGTCTGCCC GGCGAAGTGG GAAGAGGGCG CCGAAACGCT CGCTCCCTCG ATCGAACTCG TCGGCAAGAT CTAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTATCA TCGGAAGTTC GATCAAGCCG TTCAGCGCCA CCTCTTACCA TCAGGGCAAG TTCGTCCCCG TGACGGACGC CGATGTGAAG GGCAAATGGG CGGTGTTCTT CTTCTATCCG  GCCGACTTCA CCTTCGTCTG CCCGACCGAG CTCGAAGACC TCGCCGACCA GTATGAAACG CTCCAGAGCC TTGGCGTCGA AGTCTATGCC GTTTCGACCG ACACGCATTT CAGCCACAAG  GCTTGGCACG ACAGTTCACC GGCGATCGGC AAGATCGCCT ATCACATGCT GGGTGACCAG AACCATGTCC TCGCCAATAA TTTCGGCGTG CTGCGCGAAG ATTCGGGCCT TGCCGACCGC  GCGACCTTCG TTGTCGATCC CGACGGAGTG ATTCAGGTGA TGGAAATCAC CTGCGAAGGC GTCGGCCGCA ATGCAGGGGA ACTGGTCCGC AAGATCAAGG CTGCGATCCA TGTCCGCGCC 
AACCCCGGCC AGGTCTGCCC GGCGAAGTGG GAAGAGGGCG CCGAAACGCT CGCTCCCTCG ATCGAACTCG TCGGCAAGAT CTAA 

Retrieve as FASTA