Entry information : NarAhpC
Entry ID 4917
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2016-01-26 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-27 (Christophe Dunand)
Peroxidase information: NarAhpC
Name NarAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Sphingomonadaceae Novosphingobium
Organism Novosphingobium aromaticivorans    [TaxId: 48935 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NarAhpC
start..stop
S start..stop
SPspAhpC 333 9e-119 1..187 1..187
SalAhpC 315 5e-112 1..187 1..187
MaqAhpC 301 2e-106 1..187 1..187
OspAhpC 301 2e-106 2..187 3..188
Literature and cross-references NarAhpC
Literature Copeland A. et al., US DOE Joint Genome Institute. Complete sequence of Novosphingobium aromaticivorans DSM 12444. Unpublished

Protein ref. GenBank:   ABD26157.1 UniProtKB:   Q2G7L6
DNA ref. GenBank:   CP000248.1 (1804839..1805402)
Protein sequence: NarAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   20439.24  
PI (pH):   %s   4.73
Sequence
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Send to Peroxiscan
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MSIVGTKLKP FQATAFHQGK FVDVSDADVV GKWGVFFFYP ADFTFVCPTE LEDLAGIYEE LQGLGVEVYS VSTDTHFSHK AWHDSSPAIG KINYYMLGDQ NHTISNNFGI LREGVGLADR 
GTFVTDPDGT IQLVEITPEG VGRNAAELLR KIKAAKYWRE HPGQVCPAKW EEGAETLAPS IDLVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="DSM 12444".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGATCG TCGGAACCAA GCTGAAGCCG TTCCAGGCTA CCGCTTTCCA TCAGGGCAAG TTCGTCGACG TCAGCGACGC GGACGTGGTC GGCAAGTGGG GTGTGTTCTT CTTCTACCCC  GCCGACTTCA CCTTCGTCTG CCCGACCGAG CTTGAAGACC TCGCCGGCAT CTATGAAGAG CTGCAGGGCC TCGGCGTCGA AGTCTACTCG GTCTCGACCG ACACCCACTT CAGCCACAAG  GCCTGGCACG ACAGCTCGCC GGCCATCGGC AAGATCAACT ACTACATGCT CGGCGACCAG AACCACACGA TCTCGAACAA CTTCGGCATC CTGCGCGAAG GCGTCGGCCT TGCCGACCGT  GGCACCTTCG TGACCGACCC GGACGGCACG ATCCAGCTCG TCGAGATCAC GCCCGAAGGC GTGGGCCGCA ACGCTGCGGA ACTGCTGCGC AAGATCAAGG CCGCCAAGTA CTGGCGCGAG 
CACCCCGGCC AGGTCTGCCC TGCCAAGTGG GAAGAAGGGG CCGAAACGCT TGCTCCGTCG ATCGATCTCG TCGGCAAGAT CTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGATCG TCGGAACCAA GCTGAAGCCG TTCCAGGCTA CCGCTTTCCA TCAGGGCAAG TTCGTCGACG TCAGCGACGC GGACGTGGTC GGCAAGTGGG GTGTGTTCTT CTTCTACCCC  GCCGACTTCA CCTTCGTCTG CCCGACCGAG CTTGAAGACC TCGCCGGCAT CTATGAAGAG CTGCAGGGCC TCGGCGTCGA AGTCTACTCG GTCTCGACCG ACACCCACTT CAGCCACAAG  GCCTGGCACG ACAGCTCGCC GGCCATCGGC AAGATCAACT ACTACATGCT CGGCGACCAG AACCACACGA TCTCGAACAA CTTCGGCATC CTGCGCGAAG GCGTCGGCCT TGCCGACCGT  GGCACCTTCG TGACCGACCC GGACGGCACG ATCCAGCTCG TCGAGATCAC GCCCGAAGGC GTGGGCCGCA ACGCTGCGGA ACTGCTGCGC AAGATCAAGG CCGCCAAGTA CTGGCGCGAG 
CACCCCGGCC AGGTCTGCCC TGCCAAGTGG GAAGAAGGGG CCGAAACGCT TGCTCCGTCG ATCGATCTCG TCGGCAAGAT CTGA 

Retrieve as FASTA