Entry information : ParAhpC
Entry ID 4919
Creation 2007-03-04 (Nicolas Rouhier)
Last sequence changes 2016-01-26 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-27 (Christophe Dunand)
Peroxidase information: ParAhpC
Name ParAhpC
Class AhpC like peroxiredoxin    [Orthogroup: AhpC001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Moraxellaceae Psychrobacter
Organism Psychrobacter arcticus    [TaxId: 334543 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ParAhpC
start..stop
S start..stop
SloAhpC 281 2e-98 3..188 4..189
BliAhpC 281 3e-98 3..188 2..187
SwoAhpC 279 1e-97 3..188 4..189
CpsAhpC 278 2e-97 3..188 4..189
Literature and cross-references ParAhpC
Literature Ayala-del-Rio,H.L. et al., The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth Appl. Environ. Microbiol. 76 (7), 2304-2312 (2010).
Protein ref. GenBank:   AAZ19645.1 UniProtKB:   Q4FQR3
DNA ref. GenBank:   CP000082.1 (2208259..2208825)
Protein sequence: ParAhpC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   188
PWM (Da):   %s   20477.13  
PI (pH):   %s   4.38
Sequence
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Send to Peroxiscan
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MASIINQEIP EFSAQAFVNG EFKTITSEDV KGSWAIFLFY PADFTFVCPT ELEDMAAHYE ELKGLGVEVY SVSTDTHFTH KAWHDSSEAI GKVTYPMIGD PTGRITRGFN VMIEEAGLAE 
RGTFLVDPDG LIQVAEIHAG GIGRSAKDML RKVKAAQYVR ENDGEVCPAA WEAGQETLKP SLDLVGKI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="273-4".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCTA TCATCAATCA AGAAATCCCA GAATTTTCAG CACAAGCGTT TGTAAACGGT GAATTCAAAA CCATCACCTC TGAAGACGTA AAAGGCAGCT GGGCGATTTT CCTATTTTAC  CCAGCCGACT TTACCTTTGT TTGCCCAACT GAACTTGAAG ACATGGCAGC TCATTACGAA GAGCTAAAAG GCTTAGGCGT AGAAGTGTAC TCAGTATCAA CGGATACGCA TTTCACCCAT  AAAGCATGGC ATGATTCTTC AGAAGCAATC GGTAAAGTTA CTTACCCAAT GATTGGTGAT CCTACTGGTC GTATCACGCG TGGCTTTAAC GTTATGATTG AAGAAGCTGG TCTTGCTGAG  CGCGGTACAT TCTTAGTAGA TCCTGATGGC TTGATTCAAG TTGCTGAGAT TCATGCTGGC GGTATTGGCC GTAGTGCAAA AGATATGCTG CGTAAAGTAA AAGCGGCACA GTATGTTCGT 
GAAAACGACG GCGAAGTTTG CCCAGCCGCT TGGGAAGCTG GTCAAGAGAC TTTAAAACCA AGTCTTGATC TAGTAGGTAA AATCTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCTA TCATCAATCA AGAAATCCCA GAATTTTCAG CACAAGCGTT TGTAAACGGT GAATTCAAAA CCATCACCTC TGAAGACGTA AAAGGCAGCT GGGCGATTTT CCTATTTTAC  CCAGCCGACT TTACCTTTGT TTGCCCAACT GAACTTGAAG ACATGGCAGC TCATTACGAA GAGCTAAAAG GCTTAGGCGT AGAAGTGTAC TCAGTATCAA CGGATACGCA TTTCACCCAT  AAAGCATGGC ATGATTCTTC AGAAGCAATC GGTAAAGTTA CTTACCCAAT GATTGGTGAT CCTACTGGTC GTATCACGCG TGGCTTTAAC GTTATGATTG AAGAAGCTGG TCTTGCTGAG  CGCGGTACAT TCTTAGTAGA TCCTGATGGC TTGATTCAAG TTGCTGAGAT TCATGCTGGC GGTATTGGCC GTAGTGCAAA AGATATGCTG CGTAAAGTAA AAGCGGCACA GTATGTTCGT 
GAAAACGACG GCGAAGTTTG CCCAGCCGCT TGGGAAGCTG GTCAAGAGAC TTTAAAACCA AGTCTTGATC TAGTAGGTAA AATCTAA 

Retrieve as FASTA