Entry information : Ptro1CysPrx01 (Prx VI)
Entry ID 4970
Creation 2009-01-29 (Christophe Dunand)
Last sequence changes 2010-11-08 (Myriam Duval)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-11-08 (Myriam Duval)
Peroxidase information: Ptro1CysPrx01 (Prx VI)
Name (synonym) Ptro1CysPrx01 (Prx VI)
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type Brain
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ptro1CysPrx01
start..stop
S start..stop
Ptro1CysPrx01-2 456 3e-166 1..224 1..224
Pabe1CysPrx01 456 3e-166 1..224 1..224
Hs1CysPrx01 456 3e-166 1..224 1..224
Ggo1CysPrx01 456 3e-166 1..224 1..224
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 152977801..152977895 95 N° 2 152981728..152981884 157 N° 3 152985775..152985921 147 N° 4 152986667..152986813 147
N° 5 152988150..152988278 129  
join(152977801..152977895,152981728..152981884,152985775..152985921,152986667..1 52986813,152988150..152988278)


exon

Literature and cross-references Ptro1CysPrx01 (Prx VI)
Protein ref. GenBank:   XP_001148286
DNA ref. GenBank:   NC_006468.2 (152977801..152988275)
Protein sequence: Ptro1CysPrx01 (Prx VI)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224
PWM (Da):   %s   24922.14  
PI (pH):   %s   6.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP*

Retrieve as FASTA  
Remarks Genomic (Chromo 1, 4 introns). 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCGTAAGTGGCCACCGCGTAGCCCTGT
CCTGGCCTCGGTTGCGCCGGACTCGGAGGTTCCTTCCCTGTTTCTTCTCCCTTCCGTCCTCCCGGCCGCTCAGCCCCCTGCGCCGCCCGCCCCTTCCCCCGCACCGGTTCCCGCGCGCGC
CAGGCCGTGTGGCCTCTGCTCAGCGTCGGCTGCGCTGCTGGGAGCTGGCACCCGTTCGGCCTGCCCTGCGCGGGCCACTTGATCCCTCCTGGCTTCCCCGCCTCCGGCGTGGCTGGGCAA
GGCCACGCCAAGGTGGGGGGTGGGGAGGATAAAATTGGGTTCTGCGGGTTCTGGAAACTCACCGCCCGCGGGAGGGTTTGTTGTCCGTTTAACTCGTCTTAGTAAACTGTGCAGGTAGCG
TGGTCAGGCCGAGGGCGCAGGGGCGGGGCGGCATTGACGATCACTTCCCCGGACTAGTGCCCAGGGTCGCACCGCCCTCCCACCCTCCGTTCTGGAATTTGCTCCCTGGGGAGGATGGGT
GTCTAAAGCCAAAGTCGGAGGACACAGCTGCTGGCTATAGGTTACAGGAAGGCCAACGTATCATCTGAGGGTGCAGTGGTATTTGCAGGCTTCTGGGCACAAAATGTGAAATTTAAAACC
ACTAGCTGCCAAGTAGGTGGCCGAAAGACTTTTTGTCCAGAGCCGCCTCCAATGGCCAAGATATGATTTGATAACAGCTTTAGGAAGAGCCAAGAACACTCTGCGTAGGTGTGCCTTCAG
AGATTCCAGAACTTGCAACACTTGGAGGGAAGGACATTCTGACGCTGTTCCGCTGGAGTGGCCTATTCTTGCTAGTGATGGCCGTTCCAGGCTCCAGGACACGTGTACTCCCCAACTTTG
ATACTCTCTTGTTTCCCAGTGGCTTGCCCCTCACTGTCCCCTCCGCTTTCTACCTTGCTTCTAGCACATGAGCTTGCTGATGATAGCCAAATTGATGACCTGTGATCTGACTTGGCAGTT
TTACCATTATGGATAGGAGTAGTAAATCGGTGTTGCCCTTTTTTTTTTTTTTAACAGCTCCTGAATCAGCAAACTGGAAGTTGCTTAGTTTTCATCAGAAGCATTCCAGGCATGTCTAGT
TATATTATGGTTCTGGAGTACTAGTGGTCCCACTACACTGTGGGGCTCCAAGGCTTGACGACAGTTCTTCCCCAGATTATATCCTTTTTATATACAGTATCCAGGGAGACAGGCTTATGA
AATTAATCAGTGATTGGACAGGGCTGTGCAGAGAACCAGGGAGAGATTCTTACACATCATATGCCTATCCAACCCTTTATAACCTCTTAAGTCCCTTTTCCAGCCACTGAATAGGGAAAA
GTTAAGCTTTGTGAAAGATAGGACTAGGCCATAAAAAGGTTGAGAAATGGAATATTCAAACCTTGAATGCAGAAAAATACTTTAGAAATACAGCTTATGGCCATTCTTATACTTAGGATC
TAGGTAGTAATATTTCTCCAGCAATCCTTGGGATTTTTAGAGTTGTGTTCCTTCCCATTTCTACCTGCAGCCCTCATCCCCCATCCCCATGAAACATAAACTATTTCCAGAACTCTTAGC
TTGTATAGATTAAATATTAGCATAAAACGTATTTACTGTGCCAACAATTATAAATGCTGTCACTTTTTAAGCTAACCATACTTTTTTGGGGTTTTGTTAATGTTTATTGGCCTCTAGATC
CATCTAGATTTGATCAAAAGTGGTACTTTATCAGGGAGCCATAGTTAGGAACACGATAGAAATATCTGCATTTATTAACTAATATACAAGTCTGCCTAGGATCAGGCATAGTATTCCCTA
CCTTACCGGGAAGAGAAGTTTGAGCCTTTTATAGGTTTATGACACATGGATTTTTGCCTGATTTTTCCAATTTTCTATTCTGTATATGATCCCAAATCAGACTGTCAATTTTTGATTCAG
GTATTTTTGAGAAGAAAAAATTAAAATGTATCTCTCTACCTTACCCCTGATCATTGTAAACAACTAAAGAGTTTGGGTGCTTGAGTTTACTGGACCTTATCGCTGTTTCTTTAAGTGGTA
GAAGCAGCTTCTTCATAGCACATCTTCACTAAGCAAAATATGTGTTTTCCAGGGGTCTTCTGGGGCTTAGTAAGTGGGAACCATTCTCTTGAAGGAGGAAACCTTTTGTCTTTTGAAAAT
GGGTAAGAAAATGGGAGAATGTCACTGAATTACTCTTAAGTACAGCAGTAGGAAGACTTGGAGGGGAAGGAAGGCCAAGGTAAGACATTCTTGGAGTTTATCGTATTTGTAGCCATGAGG
TAAACTGGAGTTTCACTTCTGAGGGAGGGAAGGACGTGAACTGGCTTAAAACCAGTTCCTTTTGCATGATTCAGCAAAACAGTCTTTATGGACTCACAATGGAAAAAGAACTCCTAACTT
TTCTAATTTATCCTCCTTTTAACGATAGAGGAGGAAACGCCCTGTTCCATTTCTTCTCAACTTCTGGAGACCTTCTGTTAAGTCTCATCTAACCATTAAATAGATCGTTTTCCATAGAAT
CTAAGGCCTAGATTTTACTCATAGTGATATTATCTACTTCAAAAGATATACTCTATGTTCTTCCTTTTGCCCTTCATAGTAAAGTGAACATAGTGCACACCTCCACAATCTTAAAAAAAA
ATACTAACTTTCTTCCCAGTCTTGCCATAGGGCCCTCCATCCTTTTTGTAAGAAGATCTTTTTCCTTCTTGAAACCTTGGGAGTTGAGTGGCAGCCGTAAGTAGGAAGGAGGTGCCCTTG
TCTTTGCTTGTTCTCTGTGCTCAGGGAAACTTCGGAAAGGTCAACTTGGCATCTAGGCTAGATTTAGTTATCTACTAGTTTAGGATCCTGCCTAAATCATCTGGTTTAGGATGGTTTAAG
TTGATGGGGATGTGGAGAACTGAGTGTTAAATTTTCCTTTTCAGTTGAAAGAGTAGTTTCTGTTGCCAAGAAGAAGGAAATGGTACTTCAGCTTTCTTCGTCACAGCTTGAAATGTGCTC
AAAATTATAAAATCTTAGACAATGATGACTTAGATATTAGTATTTACCTAAGAATTTGCTGTTGTAGAAATCTACATTGCAGGCTATCAAAATTCTACCTGCTTGGTCTGAAGAAAGAAG
AAAAAGAAACTGCAAATGAAGAGATAGGTAAAACTGTGAAGGTGCTATTGTTTTGTCAGAGTATAAATATTGAGTGTCATGTTTGGCAGGTTAGATCAGTAAAGTGGTTTTACAAAAGAT
TTTATATCCACTTGCTTCAAAGAAGCCAAGTGTCAACTTTAATTTTTACATATAAATAGAAGATAGAAACCTATTTATTTCAGATTACATAATTTGTTTATTATTACAGTCAGGCATTTG
TTTGGATTCAGGGCATACTGGGACATCCATTATTGGAGCTGAATGTCAGGGTCTATGCTAGAAAAAAATGTAGAAAAGGATAAGAAGAAATAATTAAGTGTTTTCAGTGAACTACTTGGC
TTGAATAGCACAGATTGTATTAGCCAAAAAGGAGTCAGGGTGGCACCATAATTATTAAAGGAGGCAACACCTTAACATTAGTCTTTTTAAATATGTGTCATCTTGAATTTCATGTCTTTG
ATTGAATTGGGCTATAAGCATAGGCTTCTCTGGAGGTAAGTAGATTGAAAAGCACTCCTCAACAGAAAAGCTTAAAAGTAAATATCATCATAAGCATTCATTTAAAAAAGAAAGCCTGTT
TTTGATCCAGAAGTTGCGACTTTTCATTCTCTGTGATGTTGGTGATAACTCTTAATTCAATTGTGACCTTGTTTTTCTTCCTTTCAGATGGGGCATTCTCTTCTCCCACCCTCGGGACTT
TACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTTGCCTGGAG
CAAG
GTTAGTATCAATTGGCATGTGCTTTGAGCCTGAGATTATAGGTCAAGTTATAAATTATGGAGTACTTGGTTTTGAGGTTAAGGTACAAGTAAGCCTTAGGTTCAGAGTTCACTAAT
TATTTGAAAATTTCAATTGAACCACACAGTGATCACATTGCTAAATCCATTGGTCAGTCAATTCTCAGCCCTCCTCTTGGCCTGCCAGCAGCATTCAACCCAGGTGATCACTGTACCTCC
TGAAACTTTTTCCTTTCTTGACTTCCAGGACACCACATTCTAGCTGTTCCTGCTCACTGATTCTTCATCTCCCAACTCCTAATTTATGCTGAAGTTACCCTGAACTTATTTCTTGGACCT
CCTCTCTTTTCTGTCTGCACTCTTTCCCTTGGTGAGCTCATCCACTCACCTTTAAATACCATCTATGTGCTGTGATTCTCAAATTTTCATCTCTATGCCAGACTCTTCCAGGTTCATTTA
ACCACTGCCTACCTAGCATCTCTCCTGGGATGTCCAGTCATCTCAAACCTAGCATGTCTAACTAGGCCTCATTCTTAGATCCAGAGTTTTACTCATCTAAGCTAATGGCAACTACATTTT
TATAGTTGTTCACACCCCAAATCCAGGAGCCATTCTGAATTCTTCATGTTTTTTCACGTCATACATCTGATTTATCCTCAAACTTGTCAGCTCTACCTTCAAAATATGTCCTGTATCATA
GATGGAAGACTCACTTCCCAGGGATCTGTGTGACTTACCCTCACCTCTTTTGGGTCTCAACTCACAGGACATTTCATCAAAGCCTTTCTTGTCCTCATTATCTAAAATTATAACTCCTTT
TCACGTTCACCATCCCCTTCTCCTCAGCACTCTGCATACTACCTATTTAGTTTGTTTGTTTCTTCCTAGTAGAGTGTAAACTCAGCAGGAACAGAGACTCCTGTTTAGTGCACTGCTGGA
ACAATGCTCACTACTCAGTATATCCTAGGCGATCAGTCAATATTTGTTGAATGAATTAACTGAAGGAAATACCTACTTCTGGCAAAAGAATTTACTTGAACAGTAAATTTGGTGGTCTGA
ATTTACCTTGAAAACATTTTAAGAACTTGACTGCACTGTGCTGTTAAGTAATAATGATAACTACTTTTTGAGGGTTGTATACTAGAAACTATGTCAAACGTGCAGTTGAATGAAAGATGT
ATTGACTTGTGAGTTAGGGGTCTGTGGCTGCATCCTATAGCAGTTAATGCCAGTTAATCCTAAATACCTGAGACTAGAAGAATCATGTGTAGGAGAAAAAAGAAGGGCAGTTATCTGTCT
TGAAGTAGAATTTTTTTTCATTCCTTACACTTCTCAGTGAGTGGTAACTGTAGTTTTTGCTATCATTTTTCATTTTCATTTTTGCAGTTGAACATACTTTTTTCACTCACAGAGTTGGAG
GGACTTGCCCAAGACTGCCCAATGGCAATGAGATTTCAACCTCAAATCAATGTTCTTTTTAATGCAAGATGATACAGAGTAGGATTTAGCCTAATTTAGGATAGAATAAAGCCAAATAAT
TTAGGATAGGTTCTTTGGTGTTCATGGGTGTAATCTAATGCCCATGATGCAAGTGGCAGAGTAGAGAATTAGTGCACAGCAATAATTAAAGTGACATATTGCCAAAGGAAGCGGTTATAG
CCCATTGTATAATACCTTTTAAAGGACAGACGCATACTCAGGTTTATTTTACCTGCTGAGCTTCTGCCTTAGAAGTTTTCAGAATTGTAATTACATTGAATAGGAAAAAAGTCTGAACTA
TCAGAAGCAGTGCCGCAACTTTGACAAACAACTGATTATATAATAATCTGCCTCTAGCATGAGACTATATTAATTATTATTTAGCTCTGGTGACTTCATAAGCAGCCAATGACAACAGAA
AGTTAAGATAATAAAATGAAGGAATGTTACAATTTGTTGTCATCCGGGAGCCTGAGGCAGGAGAATGGCTTGAACCCGAGAGGTGGAGGCTGCAGTGAGCTGAGATCGCGCCACTGCACT
CCAGCCTGGGCAACAGAGACTCCACCTCAAAAAAATAAATAAATAAAAAGAATTTGTTGTTATCCACTTCAGAGCTCATTAATGCCACATTTGTCACATCTCTGTTGAGAAATCCACAAT
GGTTTTGTATCTGCTATGCCATCAAGCCCCTGTTTTACTTTCAAGCTACACACAATAGACGTTATTCCAATTTTAAATCCTCTTTTCCATTACTTGCTAAACTCTATCCAACTAAGTTCC
TCACTCTCCTATCAATAGTTTATGTACAGAGTTGCCCACATGTTTCATTAATATCGTTCCTGGCTGGGCACGGTGGCTCTCGCCTGTAATCCCAGCACTCTGGGAGGCTGAGGCAGGTGG
ATCACAAGGTTAGGAGTTCAAGGCCAGCCTGGCCAAGATGGCGAAACCCCGTTTCTACTAAAAATACAAAAAAAAATTAGCCGATGTGGTGGCAGGCGCCTGTAATCCCAGCTATTCAGG
AGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGGTTGCGGTGAGCCAAGATCGCACCAGTGCACTCCAGCCTGGGCGACAGCAAGACTCTGTCTCAAA
AAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACACACATACACACATATACACACACATATACATATATATACATATACACACGTATATAATATA
TATACACATATATATATGTGTGTGCATATATATATATAGTTCCTGATTCCTAGAATGCCTTTCTTTTCTCTGTGAAAAATCTTACCCATCCTTCAAGGGCCTAGATAGAAGTCCTGTTCT
TTTCTTGAAGCCTTTTGTAACTTTTGGAGTCCTACAAATGGGAGTGTTCATATACTTCAGTATTTACCATCCACCATTTAACATTAGTCTTGCATTTGCTGCTGCTTCATACTGGAATCA
TCTCTAACCAAATGAGAAGTTCCTTTGAAGGGAGGAGCCGTGTCTTACTCATCTGTATTCCACATGTATTTACCATAATGCTTAGCCCACCTTAAGTGCTATATCAATGCTTAATCAAAT
AACAAAACTAGATTTTTTTTTTCTCCAAAAGCTTCCAGGGATAGGAAAAGTAGAAATAAATGGATGAATAAAGTTTTACTAGGGAAGGAGGGAGGTGTATCATTTTTCTTTAGTTCAGAC
TTGAAATGCTTTGTTTTCTCTTTGAATTTCACCCTAGTTTAGGTTTACTTCTGCCTTTTCACCCATTTATTTTTGACTTGTCCTTCAAGTATATATTCAACTCTCCATTCTTGTGTTTGC
TTTGTTTTGTGATTTGTTTTTTTTTTTTTTTTTTGGTCATTTCTTATTTGTCTTGTAACTTAGCATCTGAGTCAGGATGCTTTTGAGGTAGGGACCAGATCTATAAGATTTTCTTTACAT
ATGGCATTATTTCTAGATGTGATGGATTTAACAAACCTATTGTTATCTGATGATTTTTACAGTATTTGGGTACCCAGAGGTACCTTGTATTTGGATCTAACTAAATTATTGCAATTTTAA
AGGGGTTGCTGCTATTTTCTCATAGCAGTAAAAGCATGCTGAATTTAAGAGAACTGGGCATGAAAACAGCTTTGGTCCATGATTACAACCTAAGTACTGTACTCTGCTGTTATTCCTGGC
AATAATTGGAATGAAGAGTGTTCATCTACTCACTTTTTAAAATTAAAATTGCTTAAAGAAAATTACTGTGATTTGGTCCTCTTTCCTGTCTTGCAAGGTGATGGCTGTTAACTGATGAAA
TTCAGAGCACGTGTTGGGTTTAGATTCTTCTTTCCCCTTTTACTTGTGTTTCAGGATATCAATGCCTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATAGG
AATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCAGAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
GTAGGTCATACAAATTCATTTTGTAGTTAGCATAACTGA
TCAGGCTGTATGTCCGTGTAAATGCTGGTACCAGCTAGAGGAGATAGGGGAATATCTACAATTATGAAATAACTGTGTATTGGCGACAATATCACCGATTATCTGTAATGCTGATGCAAT
TTTCAGCTAAATTTTTCAACCGCTTTATTCATAGTTCATGGAAATCTACAAAAAAAAAGTTGTTTATCCTAAAATGTCTTCCAGAATTGAGAAACCTTTTCATAGCTCTCCTGACTGCTC
TCCTGACTGCCCTGTCTTTAAAGCGATGGGCCATATCCTTCTTCATAAGGCAGCTCTGTTTTAATTTTTTATTTGTTCTGTCCTCCGCCCACTAGAAAACAAACCCAATCCCTCATCTGA
ATAAATGCACAACTATTCAAGGAACAATATCAACTCCCATTAGTATTATTTTTATGAGTCATCCCCAATTGACACAGCCTTTCCCTTGATTAAATTTGCATATCAGTTTTTCTTACTGGG
AAAGCCAGAACCAAATAGAATTCCCTTCTACGTTTAGAAAATAACGGGGAGAAGAAAATTATCTGTATTCCAGCCATCCACATTAGCAGTTGGTGTATCCTTCTAGATGCTTTGTTTTTG
TCTTGTTTTTATACCCTTGAACATTATTAATGACTGCAGAGCTTTCTAAGTGGCTTTAATAACACTCAAAAAACTCTTCCTATTTATGCCCCTCTGTGCTTTACAGGTGTTTGTTTTTGG
TCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGCCACCCC
AGTTGATTGGAAG
GTAAAGATGTTTTTAAAAAGCAGTTTCTCTACTTGCCTGAAGGGCCAGTCTCTAAATGGCCAACTTCAAGGTCTGTGTTACCTGTTTCTAGCACGCAAGTACGCTGG
GAGGATTTTTCCTCATGGCTGAGTTCAAGATTTGCTGAGAGGCCCTTTTCAAGGTCTTTATAACACCTTTTATACACAACACAAACTCCCTATATGGCTTTCCAACTTTTAGATAATTTG
GAAAAATTATTGGTCAGAATGATTCCTTTTCCCAATAGAAGGTTTAAAAAAAAAAAAAAACTTTTATCTAACCCTTCCCTGATGGCAAAATATTTATCGCACAATCTTAATTGGCCATTT
CCGTTAAGTCATGGCTGTAAAAGTACTGGTGTATTAATGTCATTAAGTATTTCATTTCTCTTAAGCTTCATTCTTTTAAACCTGTGCTAGAATTCTCCAAAATTTGTTCATAAACTTTTC
ATCTTTAGGACATGGATAACATCACAAGAGTATCTTAACATTGCTACATTTTTAAAATAATGCTAACCTGAATAGCAGGTTTTGTTTTGTTTTTTCTGACAGACAAATCACTTAAATTCT
GTATCCACTAGTTAACTTATTATTACTTATTTATGTACTTATTGAGCCCAGATAGTAGTGAACTGGGGAGATAGCAGTGAATAATAGAAAGTCCTTGCCCTCATAGAACTTCCATTCCAG
TGAGTGGAGACAAACAGTAAACAAGTTTATTAAGTGGTGATAACAGGTGCTACAGGGACGAATCAAGCACAGATGGGGAGAATAACAGCACGGGGTGGGAGAGTGACTGTCAAGGAATGC
CTGTCTATGAAGGGACCTTTGGAGAAAAACACGGAGAAGATGTGACCAAGGCATGTATACTTGTGAGGGACGAGCACTATAGGCAGAAGGAGCAGTTAGTGCAAGAAACTGGGCCTACAA
GTGAGCTTGGCATGTTGGAGGAATACAAGGAAAGCTAGCATGCCTGGAGAAGAAGCCGCAGAAGGTGGGGTGAGGGACAAGAGACGAGAGGAGGCAGGATTCCATCACACAGGGCTTGCA
GGCCATGATACTCAGAATTAAATGTAAAGTGTGGTGGCCAGCTGTTACTGGGTTTAAAACAGGGCTGTTTCTTGTTAAGATGGGGGAACTGCTTTCCTGCCAAAAGTGCCAAAGATCAAC
TTGGAAAACAAAATCCTCACAGAGGGGAGAGTAAAGAACACTTGATTAGTCTCATTAGCACCTGTAGCTACTTTTCTAAAGTTAATTCCTGAAGGCCTTGAAGCTTCACTATGAGATTGA
ATTTCACCATTCTCAATGTCTTTCAATAGGATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAACTCTTCCCGAAAGGAGTCTTCACCAAAGAGCTCCCAT
CTGGCAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCATGGGGCATTCTCTTCTCCCACCCT
CGGGACTTTACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTT
GCCTGGAGCAAG
GATATCAATGCCTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCA
GAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
GTGTTTGTTTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATT
CTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGCCACCCCAGTTGATTGGAAG
GATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAA
CTCTTCCCGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGGCAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA