Entry information : Psti1CysPrx
Entry ID 4979
Creation 2007-03-11 (Nicolas Rouhier)
Last sequence changes 2007-03-11 (Nicolas Rouhier)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: Psti1CysPrx
Name Psti1CysPrx
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia
Organism Pichia stipitis    [TaxId: 4924 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Psti1CysPrx
start..stop
S start..stop
Kl1CysPrx 338 6e-119 1..254 2..248
Nf1CysPrx 333 2e-116 16..256 31..268
Afum1CysPrx 331 1e-115 16..255 31..267
Yl1CysPrx 330 2e-115 18..254 10..248
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 317942..318712 771  
complement(join(317942..318712))


exon

Literature and cross-references Psti1CysPrx
Literature Jeffries,T.W., Grigoriev,I., Grimwood,J.A., Laplaza,J.M., Aerts,A.,
Salamov,A., Schmutz,J., Lindquist,E., Dehal,P., Shapiro,H.,
Jin,Y.-S., Passoth,V. and Richardson,P.

US DOE Joint Genome Institute

Genomic sequence of the xylose fermenting, insect-inhabiting yeast,
Pichia stipitis

Unpublished

Submitted (12-DEC-2006)
Protein ref. GenPept:   ABN65661
DNA ref. JGI genome:   chr_3.1 (318712..317942)
Protein sequence: Psti1CysPrx
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   256
PWM (Da):   %s   28439.89  
PI (pH):   %s   9.27
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLSRVLIRSA AVRTALPRAT PVFRPSIVGT RFYSFKQEDQ PRIRIGSTAP NFEVNTTSGK IDFHSYIGDN WVVLFSHPAD FTPVCTTELG AFSKLKPEFD KRGVKLIGLS TEGVDSHNQW  IKDIEEVVTG GEKFGFPIIA DSTKEVAYKY DMVTEDDFKN LESGVVFTVR SVFVIDPAKK IRLTMTYPAS TGRNTAEVLR VVDALQLADK RGIATPVDWT EGQDVIIPPT VSNEAAKEKF 
GSFKQVKPYL RFTKLD 

Retrieve as FASTA  
Remarks Genomic (Chromo 3, no introns). strain="CBS 6054".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTGTCAA GAGTGTTGAT TCGTTCTGCT GCTGTCAGAA CTGCTCTTCC CAGAGCCACC CCGGTTTTCA GACCATCTAT AGTCGGAACT CGTTTCTATT CGTTCAAGCA AGAAGACCAA  CCCAGAATCA GAATCGGCTC CACCGCTCCA AACTTCGAAG TCAACACCAC TTCTGGCAAA ATTGACTTCC ATAGCTACAT CGGCGACAAT TGGGTTGTTC TTTTCAGTCA CCCAGCTGAT  TTCACTCCAG TCTGTACCAC CGAGTTAGGT GCATTTTCCA AGTTGAAGCC GGAATTCGAT AAGAGAGGTG TCAAGTTGAT TGGTCTTTCC ACCGAAGGTG TCGATAGCCA CAACCAATGG  ATCAAGGATA TCGAGGAAGT TGTCACCGGT GGTGAAAAGT TTGGCTTCCC TATCATTGCC GATTCCACCA AAGAAGTTGC TTATAAATAT GATATGGTTA CTGAAGATGA CTTCAAGAAT  CTCGAATCCG GAGTTGTATT CACTGTCAGA TCTGTCTTCG TCATTGACCC AGCCAAAAAG ATTAGATTGA CCATGACATA CCCTGCTTCT ACTGGTAGAA ACACTGCTGA AGTATTGAGA  GTTGTTGATG CTTTGCAATT GGCTGACAAG AGAGGCATTG CTACTCCCGT CGACTGGACC GAGGGCCAGG ATGTCATCAT TCCTCCTACA GTTTCTAACG AGGCTGCTAA GGAAAAGTTT 
GGAAGCTTCA AACAAGTCAA GCCATACTTG AGATTCACCA AGTTGGACTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTGTCAA GAGTGTTGAT TCGTTCTGCT GCTGTCAGAA CTGCTCTTCC CAGAGCCACC CCGGTTTTCA GACCATCTAT AGTCGGAACT CGTTTCTATT CGTTCAAGCA AGAAGACCAA  CCCAGAATCA GAATCGGCTC CACCGCTCCA AACTTCGAAG TCAACACCAC TTCTGGCAAA ATTGACTTCC ATAGCTACAT CGGCGACAAT TGGGTTGTTC TTTTCAGTCA CCCAGCTGAT  TTCACTCCAG TCTGTACCAC CGAGTTAGGT GCATTTTCCA AGTTGAAGCC GGAATTCGAT AAGAGAGGTG TCAAGTTGAT TGGTCTTTCC ACCGAAGGTG TCGATAGCCA CAACCAATGG  ATCAAGGATA TCGAGGAAGT TGTCACCGGT GGTGAAAAGT TTGGCTTCCC TATCATTGCC GATTCCACCA AAGAAGTTGC TTATAAATAT GATATGGTTA CTGAAGATGA CTTCAAGAAT  CTCGAATCCG GAGTTGTATT CACTGTCAGA TCTGTCTTCG TCATTGACCC AGCCAAAAAG ATTAGATTGA CCATGACATA CCCTGCTTCT ACTGGTAGAA ACACTGCTGA AGTATTGAGA  GTTGTTGATG CTTTGCAATT GGCTGACAAG AGAGGCATTG CTACTCCCGT CGACTGGACC GAGGGCCAGG ATGTCATCAT TCCTCCTACA GTTTCTAACG AGGCTGCTAA GGAAAAGTTT 
GGAAGCTTCA AACAAGTCAA GCCATACTTG AGATTCACCA AGTTGGACTA A 

Retrieve as FASTA