Entry information : AboDiHPOX (ccpR)
Entry ID 4989
Creation 2007-03-20 (Filippo Passardi)
Last sequence changes 2007-03-20 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-04-19 (Christophe Dunand)
Peroxidase information: AboDiHPOX (ccpR)
Name (synonym) AboDiHPOX (ccpR)
Class Other di-haem peroxidase    [Orthogroup: DiHPOX001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Alcanivoracaceae Alcanivorax
Organism Alcanivorax borkumensis    [TaxId: 59754 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AboDiHPOX
start..stop
S start..stop
DacDiHPOX 387 2e-133 2..398 1..399
AvaDiHPOX 386 2e-133 16..391 6..382
LinDiHPOX_56601 337 2e-114 44..392 5..359
LinDiHPOX_L1-130 337 5e-114 44..392 45..399
Literature and cross-references AboDiHPOX (ccpR)
Literature Schneiker S. et al. Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis. Nat. Biotechnol. 24 (8), 997-1004 (2006)
Protein ref. UniProtKB:   Q0VLX6
DNA ref. GenBank:   AM286690.1 (2698443..2699651)
Protein sequence: AboDiHPOX (ccpR)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   402 (368)
PWM (Da):   %s   44111.36 (40511.4)  
PI (pH):   %s   4.64 (4.61) Peptide Signal:   %s   cut: 35 range:35-402
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMKKPFLLLA GQSPGLFLVL GTLLLSGCPE QSETRVDDQG ASYSAYDWQL PENIPLPREP ADNPMTEEKF QLGRHLFYDK RLSVNGTISC SSCHHQDKAF SDGVDRPAGA TGTLHPRNSQ  ALVNVAWYNT LTWGNPVLST IEQQIMLPLF GDDPIEHGIN GANSEQILMN LQSDPVYAPL FAAAFPEQDE PLFGDTAYSN IVKSLASFVR GLASFNSPFD RNELSASAKR GSALFNSEKL  ECFHCHGTYN FSDATVDRRT SYIEAQFHNN GLYNIDGLGG YPEPNTGRYE LTGKAHHMGQ FRAPSLRNVA LSAPYNHDGS VETLEQVIRN YAAGGRNITS GPNTGDGRMS PYKDSFIVSF 
SISDSEIADV VAFLESLTDE EFINNPRFSN PWTESSPQDT TP 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="SK2 / ATCC 700651 / DSM 11573".