Entry information : VvuDiHCcP_CMCP6
Entry ID 5060
Creation 2007-03-27 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-07 (Christophe Dunand)
Peroxidase information: VvuDiHCcP_CMCP6
Name VvuDiHCcP_CMCP6
Class Di-haem cytochrome C peroxidase    [Orthogroup: DiHCcP001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Vibrionaceae Vibrio
Organism Vibrio vulnificus    [TaxId: 672 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvuDiHCcP_CMCP6
start..stop
S start..stop
VvuDiHCcP_YJ016 677 0 1..328 1..328
VpDiHCcP 604 0 1..328 17..344
AhyDiHCcP 433 4e-154 23..328 18..323
SpeDiHCcP 424 3e-150 23..326 22..325
Literature and cross-references VvuDiHCcP_CMCP6
Literature Kim,Y.R. et al., Characterization and pathogenic significance of Vibrio vulnificus antigens preferentially expressed in septicemic patients. Infect. Immun. 71 (10), 5461-5471 (2003)
Other sequence link http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=AAO07861
Protein ref. GenBank:   AAO07861.1
DNA ref. GenBank:   AE016796.1 (1022920..1023906)
Protein sequence: VvuDiHCcP_CMCP6
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (309)
PWM (Da):   %s   36242.65 (34270.5)  
PI (pH):   %s   5.7 (5.24) Peptide Signal:   %s   cut: 24 range:20-328
Sequence
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Send to Peroxiscan
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MKKIIAVSLL SVVSFATLAE RQAQEPIKVI DPIVGLDAKK VELGKTLWFE PRLSASNTIS CNSCHNVAKG GVDNLPSSIG HKWAIGPINS PTVFNSDLNF VQFWNGRAKD LQEQAAGPIE  NPLEMAFTHQ LAIDTLKSIP QYRTWFKQAY GVEEFTLEQV TDAIATFEKT LRTPNAPFDL WLRGEDRALT TAQVEGYELF KAKGCTACHS GPLAGGQMYQ KMGLVKPFET ANPDVGRKAI 
TGKEFDEFVF KVPTLRNIEL TYPYFHDGSV WDLQEAVEVM ADIQLGQKLT KDESGKITEF LKSLTGEQPQ IVLPHLPPST IETARPQI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="CMCP6".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAAAAA TCATTGCAGT GAGTCTCTTA TCTGTCGTGT CATTTGCGAC CTTGGCAGAA CGTCAGGCGC AAGAACCGAT CAAAGTGATT GATCCGATTG TTGGGTTGGA TGCGAAGAAA  GTTGAATTGG GAAAAACCTT ATGGTTTGAG CCTCGACTAT CAGCCTCTAA CACCATTTCG TGTAACTCAT GCCATAACGT GGCCAAGGGT GGGGTGGATA ACCTGCCAAG CTCCATTGGA  CATAAATGGG CGATTGGGCC GATCAATTCA CCCACGGTGT TTAACTCGGA TCTCAACTTC GTGCAGTTCT GGAATGGTCG CGCCAAAGAT CTTCAAGAGC AGGCCGCAGG GCCGATTGAG  AATCCGCTAG AGATGGCATT CACCCATCAG TTGGCGATCG ATACCTTGAA ATCGATTCCT CAATACCGCA CTTGGTTCAA ACAAGCGTAT GGGGTGGAAG AGTTCACCTT AGAGCAAGTT  ACGGACGCCA TCGCGACCTT TGAGAAAACG CTTCGTACCC CCAATGCACC GTTTGACTTG TGGTTAAGAG GGGAAGACCG CGCGCTCACC ACGGCCCAAG TGGAAGGTTA TGAGCTGTTC  AAAGCGAAGG GGTGTACGGC GTGTCATAGC GGGCCCTTAG CCGGAGGGCA GATGTACCAA AAAATGGGGT TAGTAAAGCC TTTTGAAACC GCCAATCCAG ATGTAGGGCG CAAGGCGATT  ACTGGCAAAG AGTTCGATGA GTTTGTCTTT AAGGTGCCGA CATTACGCAA TATTGAGCTC ACCTACCCCT ACTTCCACGA CGGCTCAGTG TGGGATCTTC AAGAAGCGGT AGAAGTGATG  GCAGACATTC AGTTGGGGCA AAAACTGACC AAAGATGAGT CTGGTAAAAT CACCGAGTTT CTCAAATCTC TGACGGGTGA ACAGCCGCAA ATCGTTTTGC CGCATTTACC ACCGTCTACG 
ATTGAAACGG CGCGACCACA AATC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAAAAA TCATTGCAGT GAGTCTCTTA TCTGTCGTGT CATTTGCGAC CTTGGCAGAA CGTCAGGCGC AAGAACCGAT CAAAGTGATT GATCCGATTG TTGGGTTGGA TGCGAAGAAA  GTTGAATTGG GAAAAACCTT ATGGTTTGAG CCTCGACTAT CAGCCTCTAA CACCATTTCG TGTAACTCAT GCCATAACGT GGCCAAGGGT GGGGTGGATA ACCTGCCAAG CTCCATTGGA  CATAAATGGG CGATTGGGCC GATCAATTCA CCCACGGTGT TTAACTCGGA TCTCAACTTC GTGCAGTTCT GGAATGGTCG CGCCAAAGAT CTTCAAGAGC AGGCCGCAGG GCCGATTGAG  AATCCGCTAG AGATGGCATT CACCCATCAG TTGGCGATCG ATACCTTGAA ATCGATTCCT CAATACCGCA CTTGGTTCAA ACAAGCGTAT GGGGTGGAAG AGTTCACCTT AGAGCAAGTT  ACGGACGCCA TCGCGACCTT TGAGAAAACG CTTCGTACCC CCAATGCACC GTTTGACTTG TGGTTAAGAG GGGAAGACCG CGCGCTCACC ACGGCCCAAG TGGAAGGTTA TGAGCTGTTC  AAAGCGAAGG GGTGTACGGC GTGTCATAGC GGGCCCTTAG CCGGAGGGCA GATGTACCAA AAAATGGGGT TAGTAAAGCC TTTTGAAACC GCCAATCCAG ATGTAGGGCG CAAGGCGATT  ACTGGCAAAG AGTTCGATGA GTTTGTCTTT AAGGTGCCGA CATTACGCAA TATTGAGCTC ACCTACCCCT ACTTCCACGA CGGCTCAGTG TGGGATCTTC AAGAAGCGGT AGAAGTGATG  GCAGACATTC AGTTGGGGCA AAAACTGACC AAAGATGAGT CTGGTAAAAT CACCGAGTTT CTCAAATCTC TGACGGGTGA ACAGCCGCAA ATCGTTTTGC CGCATTTACC ACCGTCTACG 
ATTGAAACGG CGCGACCACA AATC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAAAAA TCATTGCAGT GAGTCTCTTA TCTGTCGTGT CATTTGCGAC CTTGGCAGAA CGTCAGGCGC AAGAACCGAT CAAAGTGATT GATCCGATTG TTGGGTTGGA TGCGAAGAAA  GTTGAATTGG GAAAAACCTT ATGGTTTGAG CCTCGACTAT CAGCCTCTAA CACCATTTCG TGTAACTCAT GCCATAACGT GGCCAAGGGT GGGGTGGATA ACCTGCCAAG CTCCATTGGA  CATAAATGGG CGATTGGGCC GATCAATTCA CCCACGGTGT TTAACTCGGA TCTCAACTTC GTGCAGTTCT GGAATGGTCG CGCCAAAGAT CTTCAAGAGC AGGCCGCAGG GCCGATTGAG  AATCCGCTAG AGATGGCATT CACCCATCAG TTGGCGATCG ATACCTTGAA ATCGATTCCT CAATACCGCA CTTGGTTCAA ACAAGCGTAT GGGGTGGAAG AGTTCACCTT AGAGCAAGTT  ACGGACGCCA TCGCGACCTT TGAGAAAACG CTTCGTACCC CCAATGCACC GTTTGACTTG TGGTTAAGAG GGGAAGACCG CGCGCTCACC ACGGCCCAAG TGGAAGGTTA TGAGCTGTTC  AAAGCGAAGG GGTGTACGGC GTGTCATAGC GGGCCCTTAG CCGGAGGGCA GATGTACCAA AAAATGGGGT TAGTAAAGCC TTTTGAAACC GCCAATCCAG ATGTAGGGCG CAAGGCGATT  ACTGGCAAAG AGTTCGATGA GTTTGTCTTT AAGGTGCCGA CATTACGCAA TATTGAGCTC ACCTACCCCT ACTTCCACGA CGGCTCAGTG TGGGATCTTC AAGAAGCGGT AGAAGTGATG  GCAGACATTC AGTTGGGGCA AAAACTGACC AAAGATGAGT CTGGTAAAAT CACCGAGTTT CTCAAATCTC TGACGGGTGA ACAGCCGCAA ATCGTTTTGC CGCATTTACC ACCGTCTACG 
ATTGAAACGG CGCGACCACA AATC 

Retrieve as FASTA