Entry information : VvPrx28
Entry ID 5111
Creation 2007-04-02 (Christophe Dunand)
Last sequence changes 2007-04-02 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2009-02-25 (Christophe Dunand)
Peroxidase information: VvPrx28
Name VvPrx28
Class Class III peroxidase    [Orthogroup: Prx017]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx28
start..stop
S start..stop
VvPrx27 673 0 1..333 1..332
VvPrx39 626 0 12..333 1..322
NtPrx65-1B 508 0 14..333 13..334
EgrPrx154 505 0 16..333 1..315
Literature and cross-references VvPrx28
Literature Velasco,R. et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
DNA ref. GenBank:   AM467079 (1508..2628)   CAAP02000854.1 (66960..65844) [Mismatch]
Protein sequence: VvPrx28
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333 (304)
PWM (Da):   %s   36252.09 (33074.5) Transmb domain:   %s   i13-32o
PI (pH):   %s   9.08 (8.88) Peptide Signal:   %s   cut: 30 range:30-333
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVSSWGTGRA KMPTLLFCIM FFLTVSVSSA SLKVGFYKYT CPSAETIVRK VVNKAVSRNP GMAAGLIRMH FHDCFVRGCD GSVLLDSTPG NPSEKENPAN NPSLRGFEVI DAAKAEIEAQ  CPQTVSCADV LAFAARDSAY KVGGINYAVP SGRRDGRVSL KDEPSLHLPP PFFNAKQLED NFARKGLTLD EMVTLSGAHS IGVSHCSSFS NRLYSFNATH PQDPSMDPEF ARHLKTKCPP 
PSNTGSDPTV PLEIQTPNKL DNKYYKDLKN HRGLLASDQT LFYSPSTARM VKNNARYGEN WGNKFAAAMV RMGAIDVLTG TQGEIRKNCR VVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 15, intron 1). No EST. Cultivar="Pinot Noir" and "PN40024". Contig from PN40024 contains 2 other peroxidases.