Entry information : VvDiOx03
Entry ID 5123
Creation 2007-04-08 (Christophe Dunand)
Last sequence changes 2007-04-08 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2009-02-27 (Christophe Dunand)
Peroxidase information: VvDiOx03
Name VvDiOx03
Class Alpha-dioxygenase    [Orthogroup: DiOx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue types Berries
Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvDiOx03
start..stop
S start..stop
PtDiOx02 1077 0 1..613 22..632
CsDiOx01 1056 0 1..613 22..633
CclDiOx01 1056 0 1..613 22..633
EcamDiOx01 1047 0 1..613 22..632
Literature and cross-references VvDiOx03
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
Protein ref. UniProtKB:   A5B845 [Incorrect splicing]
DNA ref. GenBank:   AM450027 (12628..16873)   CAAP02001276.1 (12875..17063)
Cluster/Prediction ref. UniGene:   Vvi.18371 [3' end]
Protein sequence: VvDiOx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   613
PWM (Da):   %s   69993.28  
PI (pH):   %s   6.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTLFDTFLFQ IVHFVDKLGV WHRLPVLLGL AYLGIRRHLH QRYNLLHVGG VNGGRYDTEE FCYRTADGKC NHPIDDQIGS QGTLFGRNMP PSTSSYRLLE PHPTVVATKL LARKKFIDNG  KQFNLIACSW VQFMIHDWID HMEDTQQIEI KAPSDIASGC PLKSFKFFKS KSIPTGSPHM EDGFLNTRTP WWDGSVIYGN NDDGMRRVRT FKDGKLKISN DGLLEHDGKG IPISGDVRNC  WAGFSLLQAL FVKEHNAVCD MLKVHHPEFD DERLYRHARL VTSAVIAKIH TIDWTVELLK TDTLLAAMRI NWYGFMGKKF KDSFGHILGP ILSGLVGLKK PRDHGVPYSL TEEFVSAYRM  HALLPDELHI RDTNSSNTAS EGECPPLIEE VPMREMVGLE GEKRLSKIGM EKMMVSMGHQ ASGAMALWNY PSWMRNLVAH DVNGEDRHDL VDMAALEVYR DRERGVARYN EFRRNLLMIP  ISKWEDLTDD EKVVEALCEV YGDDVEKLDL LVGLHAEKKI KGFAISETAF FIFLLIASRR LEADRFFTTN FNSQTYTRSG LDWVNKTETL QDVLDRHFPD MTKKWMRCSS AFSVWDSTPT 
PTNYIPLYLR PAP 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 9 introns, uncorrect prediction with FGENESH) and 6 ESTs. Cultivar="Pinot Noir", "Chardonnay", "PN40024" and "Cabernet Sauvignon".