Entry information : VvPrxIIC-2
Entry ID 5132
Creation 2007-04-06 (Christophe Dunand)
Last sequence changes 2007-04-06 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-07-11 (Qiang Li)
Peroxidase information: VvPrxIIC-2
Name VvPrxIIC-2
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type Antheridias
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrxIIC-2
start..stop
S start..stop
VvPrxII03 267 5e-94 1..143 1..143
CsPrxII02 247 6e-86 1..143 1..143
PtPrxII03 244 7e-85 1..143 1..143
PbPrxII03 244 7e-85 1..143 1..143
Literature and cross-references VvPrxIIC-2
Literature Velasco,R., Zharkikh,A., Troggio,M., Bhatnagar,S., Pindo,M., Cartwright,D., Coppola,G., Eldredge,G., Vezzulli,S., Malacarne,G., Mitchell,J., Stefanini,M., Segala,C., Gutin,N., Grando,M.S., Pruss,D., Dematte',L., Cestaro,A., Toppo,S., Fontana,P., Skolnick,M., Gutin,A., Salamini,F. and Viola,R. The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome.
DNA ref. GenBank:   AM459339 (17525..17953)
Protein sequence: VvPrxIIC-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   146
PWM (Da):   %s   15808.16  
PI (pH):   %s   4.77
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPIAVGDVI PDDTLAYFDE QDQLQQASVH SLDADRKVIV FGVPGAFTPT CSVKHVPGFI EKEGEMK*KD IDEILLVSVN APFVMKAWAK TYPDNKDVKF LADGSATYTH ALGLELDLSE 
KGLGTRPRRF ALLVDDLKVK VTNNQI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron less). Stop codon in the sequence maybe due to bad sequencing and no EST. Possible pseudogene. Cultivar="Pinot Noir".