Entry information : MtPrxII05 ( MtPrxIIE / Medtr7g103610.1[4.0])
Entry ID 5160
Creation 2007-04-08 (Christophe Dunand)
Last sequence changes 2016-04-22 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-04-25 (Christophe Dunand)
Peroxidase information: MtPrxII05 ( MtPrxIIE / Medtr7g103610.1[4.0])
Name (synonym) MtPrxII05 ( MtPrxIIE / Medtr7g103610.1[4.0])
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Leaves
Roots
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrxII05
start..stop
S start..stop
VvPrxII05 306 2e-107 41..217 38..212
PtPrxII05 304 2e-106 1..217 1..218
PtrtrPrxII05 300 5e-105 1..217 1..218
PtremPrxII05 300 7e-105 1..217 1..218
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 41929444..41930097 654  
complement(join(41929444..41930097))


exon

Literature and cross-references MtPrxII05 ( MtPrxIIE / Medtr7g103610.1[4.0])
Literature Cheung,F., Moskal,W., Cooper,J.D., Xiao,Y., May,G.D. and Town,C.D. Construction and analysis of normalized cDNA library from flowers, seeds and stems of Medicago truncatula
DNA ref. Phytozome 11:   chr7 (38843447..38842477)
Cluster/Prediction ref. Phytozome Gene 11:   31081554 UniGene:   Mtr.14209
Omic ref. Gene atlas:   Mtr.12679.1.S1_at Legoo:   Mtr.12679.1.S1_at
Protein sequence: MtPrxII05 ( MtPrxIIE / Medtr7g103610.1[4.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   218
PWM (Da):   %s   23219.24  
PI (pH):   %s   8.69
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATSLSFSRL LSSSTTTSLL SPKTKTLSSN FTLPLKFNRF NSKPLRFSSS PKISATISVG DKLPESTFSY LDPAGEVQTI TVSDLTKGKK AVLFAVPGAF TPTCSQKHVP GFVEKSAELK 
AKGIDTIACI SVNDAFVMKA WKEDLKVNDE VVLLSDGNGD FTKAIGVELD LSDKPVGLGV RSRRYALLAE DGVVKLFNLE EGGAFTFSGA DDILKVL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron) and ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACAT CACTCTCTTT CTCCAGACTC CTCTCATCTT CTACCACTAC CTCACTCTTA TCTCCCAAAA CCAAAACCCT CTCTTCCAAC TTCACCCTCC CTCTCAAATT CAACCGCTTC  AACTCAAAAC CTCTCCGATT CTCCTCTTCC CCCAAAATCT CCGCCACCAT CTCCGTCGGC GACAAACTCC CCGAATCCAC CTTCTCCTAC CTCGACCCCG CCGGCGAAGT CCAAACTATA  ACCGTCTCCG ACCTAACAAA AGGCAAAAAA GCAGTCCTCT TCGCCGTTCC AGGAGCCTTC ACACCAACAT GCTCACAGAA ACACGTTCCT GGATTCGTGG AGAAATCAGC GGAGCTAAAA  GCGAAGGGAA TTGACACCAT CGCTTGCATT TCGGTGAACG ATGCGTTCGT GATGAAAGCG TGGAAGGAGG ATTTGAAGGT TAATGATGAA GTGGTGCTTT TGTCTGATGG GAATGGTGAT  TTCACGAAAG CAATTGGTGT TGAGCTTGAT TTGAGTGATA AACCTGTTGG ATTGGGTGTT AGGTCAAGAC GTTATGCTTT GTTGGCTGAA GATGGTGTTG TTAAGCTTTT CAATTTGGAG 
GAAGGTGGTG CTTTTACTTT CAGTGGTGCT GATGATATTC TCAAAGTTCT TTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAACAT CACTCTCTTT CTCCAGACTC CTCTCATCTT CTACCACTAC CTCACTCTTA TCTCCCAAAA CCAAAACCCT CTCTTCCAAC TTCACCCTCC CTCTCAAATT CAACCGCTTC  AACTCAAAAC CTCTCCGATT CTCCTCTTCC CCCAAAATCT CCGCCACCAT CTCCGTCGGC GACAAACTCC CCGAATCCAC CTTCTCCTAC CTCGACCCCG CCGGCGAAGT CCAAACTATA  ACCGTCTCCG ACCTAACAAA AGGCAAAAAA GCAGTCCTCT TCGCCGTTCC AGGAGCCTTC ACACCAACAT GCTCACAGAA ACACGTTCCT GGATTCGTGG AGAAATCAGC GGAGCTAAAA  GCGAAGGGAA TTGACACCAT CGCTTGCATT TCGGTGAACG ATGCGTTCGT GATGAAAGCG TGGAAGGAGG ATTTGAAGGT TAATGATGAA GTGGTGCTTT TGTCTGATGG GAATGGTGAT  TTCACGAAAG CAATTGGTGT TGAGCTTGAT TTGAGTGATA AACCTGTTGG ATTGGGTGTT AGGTCAAGAC GTTATGCTTT GTTGGCTGAA GATGGTGTTG TTAAGCTTTT CAATTTGGAG 
GAAGGTGGTG CTTTTACTTT CAGTGGTGCT GATGATATTC TCAAAGTTCT TTGA 

Retrieve as FASTA