Entry information : VvPrx38 (GSVIVT01025650001)
Entry ID 5162
Creation 2009-02-26 (Christophe Dunand)
Last sequence changes 2011-07-02 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-08-11 (Christophe Dunand)
Peroxidase information: VvPrx38 (GSVIVT01025650001)
Name (synonym) VvPrx38 (GSVIVT01025650001)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type Berries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx38
start..stop
S start..stop
MePrx06 531 0 25..328 26..329
PtPrx08 531 0 23..327 25..329
PtrePrx03 525 0 23..327 24..328
AcoPrx61 513 0 29..327 29..328
Literature and cross-references VvPrx38 (GSVIVT01025650001)
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
DNA ref. GenBank:   CAAP02001992.1 (32198..30826)   AM454172 (14081..15453) [Mismatch]
EST ref. GenBank:   EC995910 [3' end]
Protein sequence: VvPrx38 (GSVIVT01025650001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   36920.39 Transmb domain:   %s   i13-35o
PI (pH):   %s   5.41
Sequence
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARNRRQLSD PGITFLFLAL LLHFYSGTSV LQLNYYSESC PRAEEIIKQQ VVNLYHKHGN TAVSWIRNLF HDCMVKSCDA SLLLETARGV ESEKLSSRSF GMRNFKYIDT IKKAVESECP  QTVSCADIVV LSARDGFELL GGPYIEMKTG RRDSKESYAT VVEDSIPNHN DSMSLVLSRF QSIGIDAEGT VALLGAHSVG RVHCVNVVNR LYPTVDPTLD PEYAEYLERR CPSPEPDPKA 
VQYARNDLET PMVLDNMYYK NILSHKGLLL VDQQLVSDPT TSPFVEKMAD DNGYFHDQFS RALLLLSENN PLTGDDGEIR KDCRYVNV* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 8, 3 introns and extra 5'intron) and 1 EST. Bad homology for the PS!!! Cultivar="Pinot Noir", "PN40024" and "Muscat Hamburg".