Entry information : VvPrx39 (GSVIVT01031312001)
Entry ID 5163
Creation 2007-04-10 (Christophe Dunand)
Last sequence changes 2007-04-10 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-07-02 (Qiang Li)
Peroxidase information: VvPrx39 (GSVIVT01031312001)
Name (synonym) VvPrx39 (GSVIVT01031312001)
Class Class III peroxidase    [Orthogroup: Prx017]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx39
start..stop
S start..stop
VvPrx27 627 0 1..322 11..332
VvPrx28 626 0 1..322 12..333
EcamPrx151 508 0 1..322 1..323
EgrPrx154 503 0 5..322 1..315
Literature and cross-references VvPrx39 (GSVIVT01031312001)
Literature Velasco,R., Zharkikh,A., Troggio,M., Bhatnagar,S., Pindo,M., Cartwright,D., Coppola,G., Eldredge,G., Vezzulli,S., Malacarne,G., Mitchell,J., Stefanini,M., Segala,C., Gutin,N., Grando,M.S., Pruss,D., Dematte',L., Cestaro,A., Toppo,S., Fontana,P., Skolnick,M., Gutin,A., Salamini,F. and Viola,R. The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
DNA ref. GenBank:   AM461949.2 (4057..5221)   CAAP02000854.1 (64213..63082)
Protein sequence: VvPrx39 (GSVIVT01031312001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (304)
PWM (Da):   %s   34982.44 (32959.5)  
PI (pH):   %s   8.32 (8.39) Peptide Signal:   %s   cut: 19 range:19-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MPTFFFCIML FLTASVSSAS LEVGFYKSSC PSAETIVRKA VNKAVSKNPG MAAGLIRMHF HDCFVRGCDG SVLLDSTPGN PSEKESPVND PSLRGFEVID EAKAEIEAQC PQTVSCADVL  AFAARDSAYK VGGINYAVPS GRRDGRISLK DEPSLHLPPP FFNAKQLEEN FARKGLTLDE MVTLSGAHSI GVSHCSSFSN RLYSFNATHP QDPSIEPEFA RHLKTKCPPP SNTGSDPTVP 
LEVQTPNRLD NKYYKDLKSR KGLLTSDQTL FDSPSTVRMV KNNARYGANW GNKFAAAMVR MGSIDVLTGT QGEIRKNCRV VN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 15, intron 1). No EST. Cultivar="Pinot Noir" and "PN40024". Contig from PN40024 also contains 2 other peroxidases.