Entry information : VvPrx42
Entry ID 5166
Creation 2009-02-26 (Christophe Dunand)
Last sequence changes 2009-02-26 (Christophe Dunand)
Sequence status complete
Reviewer Michele Oliva
Last annotation changes 2009-03-18 (Christophe Dunand)
Peroxidase information: VvPrx42
Name VvPrx42
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx42
start..stop
S start..stop
CclPrx110 525 0 1..328 3..328
CsPrx21 522 0 1..328 3..328
PnPrx90 519 0 1..329 1..329
StPrx23 512 0 14..329 11..325
Literature and cross-references VvPrx42
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
DNA ref. GenBank:   CAAP02001385.1 (56527..57749)   AM469908.2 (10530..11755) [Mismatch]
Cluster/Prediction ref. UniGene:   Vvi.20600   Vvi.23855
Protein sequence: VvPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (303)
PWM (Da):   %s   35415.71 (32424.1)  
PI (pH):   %s   7.29 (7.31) Peptide Signal:   %s   cut: 27 range:27-329
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSSKRVTWLS LTWVLVFLCL SVELEAQLQV GFYRTSCGLA EFIVKDEVRK GFIRDSGVAP GLVRMHFHDC FVRGCDGSVL IDSTPSNTAE KDSPANNPSL RGFEVIDSAK ARLEAVCKGV  VSCADIVAFA ARDSVEITGG LGYDVPAGRR DGRISLASEA STNLPPPTFT VDQLTQFFSN KGLTQDEMVT LSGAHTIGRS HCSSFSNRLY NFNGTSGQDP TLDPQYAASL KTQCPQGSTN 
TNLVVPMNPS SPSITDVGYY VDVLRNRGLF TSDQTLLTDT TTATQVRQNA GNPFLWKNKF ASAMVKMGQL GVLIGEAGQI RANCRVINS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 16, 3 introns) and 3+4 ESTs. The contig contains a second peroxidase (VvPrx43). Also found in AM467004 (partial sequence). Cultivar="Pinot Noir" and "Cabernet Sauvignon".