Entry information : GrAPx-R
Entry ID 5180
Creation 2007-08-22 (Christophe Dunand)
Last sequence changes 2007-08-22 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2007-08-22 (Christophe Dunand)
Peroxidase information: GrAPx-R
Name GrAPx-R
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium raimondii    [TaxId: 29730 ]
Cellular localisation N/D
Tissue type Whole seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GrAPx-R
start..stop
S start..stop
GhAPx-R 616 0 23..333 23..333
CclAPx-R 482 5e-173 2..334 5..335
CsAPx-R 482 6e-173 2..334 5..335
PtAPx-R 456 8e-163 26..334 28..337
Literature and cross-references GrAPx-R
Literature Udall,J.A., et al., A global assembly of cotton ESTs. Genome Res. 16 (3), 441-450 (2006). 16478941

EST ref. GenBank:   CO115625 [5' end]   CO070188 [3' end]
Protein sequence: GrAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334
PWM (Da):   %s   36064.12  
PI (pH):   %s   8.2
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTSSSATLSS SSFSSTSALS SSKFRFKFPS FSRTSSLSSR AQPFTASSST TTHNISGEIR HCSLSRRRGL AFTATLPFLL PLHEFVDSVA AKAVESGSGQ SEYLRIKEEI IKVVTKGKAA  GVLRLVFHDA GTYEMDENSG GMNGSIVYEL ERPENVGLKK SLKVLEKAKK EIEAIQSVSW ADMIAVGGAE AVSICGGPKI PVTLGRLDSG ESDPEGKMPE ESLDASGLKQ CFRRKGFSTQ 
ELVALSGAHT LGSKGFGSPV AFDNSYFKIL LEKPWNSSAG MTSMIGLPSD RAIVEDDECL RWITKYADDQ NMFFEDFKNA YMKLVNCGAK WKSM 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs (CO070188, CO115625 and CO115624).