Entry information : HvAPx-R
Entry ID 5184
Creation 2007-04-13 (Christophe Dunand)
Last sequence changes 2010-08-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-08-06 (Christophe Dunand)
Peroxidase information: HvAPx-R
Name HvAPx-R
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum
Organism Hordeum vulgare (barley)    [TaxId: 4513 ]
Cellular localisation N/D
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HvAPx-R
start..stop
S start..stop
TaAPx-Ra 632 0 1..331 1..332
FarAPx-R 578 0 1..331 1..331
BdiAPx-R 555 0 1..331 1..328
ObrAPx-R 529 0 1..331 1..330
Literature and cross-references HvAPx-R
Literature Sato,K., Saisho,D. and Takeda,K. Barley EST sequencing project in NIG and Okayama Univ. Unpublished (2002)
Cluster/Prediction ref. UniGene:   Hv.24105
Protein sequence: HvAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332
PWM (Da):   %s   35482.8  
PI (pH):   %s   6.36
Sequence
Send to BLAST
Send to Peroxiscan
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MELTNIPHLA SSSSFFFSSC SPCACRSRRT GKAVITAFAA GSRCSADPAC PEPIEQHNVN SLSVASGPAN TQCYRRRDFA AVALLPFLLP HVDMASAADS YDGSIIRDGV RNVLSKVKAA  GVLRLVFHDA GTFDISDKSG GMNGSIIYEA DRPENTGLSK SLKILRKAKE GIDQVQQVSW ADLITVAGAE AVALCGGPEI PVRLGRLDSS TADPTGKLPE ETLDVVALKT SFGKKGFSTQ 
EMVVLSGAHT IGGKGFGNPN AFDNAYFKVL LEKPRPTSSG MPIGLPTDWA LTEDDECLRW INIYAEDQDK FFADFRDAYT KLVNSGASWR TT 

Retrieve as FASTA  
Remarks Complete sequence from 19 ESTs.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGAAGGGGA TGGAGCTCAC CAACATCCCC CATCTTGCCT CCTCCTCCAG CTTCTTCTTC TCCAGCTGCA GTCCTTGCGC CTGCAGGAGT AGAAGAACTG GGAAGGCTGT GATAACAGCG  TTTGCTGCTG GTAGTAGGTG CAGTGCTGAT CCTGCATGCC CAGAGCCCAT TGAACAGCAT AATGTGAACA GCCTTTCAGT GGCCTCAGGT CCTGCAAATA CCCAATGTTA TAGAAGGAGA  GATTTTGCTG CTGTTGCTCT GCTCCCTTTT CTACTTCCTC ATGTTGATAT GGCGAGTGCG GCTGACTCAT ATGATGGATC AATTATTCGA GACGGAGTGA GGAATGTCTT ATCCAAGGTG  AAAGCAGCTG GCGTGCTTCG TTTGGTTTTC CATGATGCAG GGACTTTTGA TATTAGCGAC AAATCAGGTG GAATGAATGG CTCCATAATT TATGAAGCTG ACAGACCTGA AAATACAGGA  CTTAGTAAAT CCTTAAAGAT ACTACGAAAA GCAAAAGAAG GAATCGACCA GGTTCAGCAA GTGTCATGGG CGGACTTAAT CACAGTGGCT GGTGCTGAAG CAGTTGCACT CTGTGGAGGG  CCTGAAATTC CCGTAAGACT AGGCCGATTA GATTCCAGCA CTGCTGATCC TACCGGTAAA CTTCCTGAAG AAACATTGGA TGTTGTCGCC TTGAAAACAT CATTTGGCAA AAAGGGGTTT  TCGACACAGG AGATGGTCGT TTTATCTGGA GCTCACACAA TTGGGGGTAA AGGATTTGGG AATCCAAATG CTTTTGATAA CGCCTATTTC AAAGTACTCC TTGAGAAGCC ACGGCCGACT  TCATCTGGCA TGCCGATAGG GCTGCCCACG GACTGGGCAC TCACTGAAGA TGATGAATGC TTGAGGTGGA TCAACATCTA TGCGGAGGAC CAGGATAAAT TTTTCGCCGA TTTCAGAGAT  GCATATACCA AGCTTGTAAA CAGTGGAGCC TCGTGGAGAA CAACTTAGCT AGAATTACCT AGTTTTTTCG TCGAAATGGA GGTGTCACCC TAGCCTCTAC AGGATCGATG CACGCAACTG 
TAGAAGTTTT GCTACATGTG TAAGATTCGT GCAAAT 

Retrieve as FASTA