Entry information : LeAPx-R (Solyc08g059760.2.1[2.3])
Entry ID 5186
Creation 2007-04-13 (Christophe Dunand)
Last sequence changes 2011-07-28 (Catherine Mathe)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-22 (Messaoudi)
Peroxidase information: LeAPx-R (Solyc08g059760.2.1[2.3])
Name (synonym) LeAPx-R (Solyc08g059760.2.1[2.3])
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LeAPx-R
start..stop
S start..stop
VvAPx-R 408 4e-144 16..323 14..328
GhAPx-R 398 9e-140 44..323 47..332
GrAPx-R 397 1e-139 44..323 47..332
MguAPx-R 386 1e-135 2..323 3..309
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..154 154 N° 2 246..366 121 N° 3 1268..1383 116 N° 4 1701..1771 71
N° 5 1959..2001 43 N° 6 2090..2186 97 N° 7 2552..2635 84 N° 8 4833..4954 122
N° 9 5329..5395 67 N° 10 5576..5681 106  
join(1..154,246..366,1268..1383,1701..1771,1959..2001,2090..2186,2552..2635,4833 ..4954,5329..5395,5576..5681)


exon

Literature and cross-references LeAPx-R (Solyc08g059760.2.1[2.3])
Literature Takahashi,H., Watanabe,Y., Arie,T., Ichinose,Y., Kodama,M., Ezura ,H. and Shibata,D. Full-length cDNA sequences from tomato (Solanum lycopersicum cv Micro-Tom) leaves treated with pathogens
DNA ref. GenBank:   AEKE02019264.1 (36453..30773)
Cluster/Prediction ref. UniGene:   Les.16652
Protein sequence: LeAPx-R (Solyc08g059760.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327
PWM (Da):   %s   35402.03  
PI (pH):   %s   5.52
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSNTVAVDCWLLSSGVSSFTSTSKLYFPANFSRKPRFGSNTIRASATTNGSSEGVIYKALLCGRRALLSMITLPLVMPCERIDNSVGAIAADESFQVREEIRKVLSKSKAAGVLRLVFHDAGTFEIDEKTGGMNGSIVYELDRPENKGLKKSLKILDKAKSQIDLVQSVSWADIIALAGAEAVSLCGGPSIPIQLGRIDSMVQDPEGKLPEESLDAISLKQCFERKGFSTQELVALSGAHTLGSKGFGNPTVFDNEYFKILMEKPWLSSGSMTSMVGLPSDRALVEDDECVGWISKYAEDQSLFFDDFKNAYTKLVDTGATWKKAL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns) and 6 ESTs. Cultivar="Micro-Tom".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTAACACCGTCGCCGTCGATTGTTGGCTTCTCAGTTCCGGCGTTTCCTCCTTTACATCCACTTCCAAGTTGTACTTTCCGGCCAATTTTTCTCGAAAGCCACGCTTTGGTAGCAAC
ACAATTCGAGCTTCCGCCACCACAAACGGTTCAA
GTAAGCAGTTAATCTTTAATTTCATGAAATATTAGATTTTATTATCTGAAATTTGTTGATATTTGTAAATGTGAGATTTTTCGAAT
TACAGGTGAAGGTGTTATTTACAAAGCGTTATTATGTGGAAGAAGAGCCTTACTATCTATGATTACCTTGCCTCTTGTTATGCCGTGTGAAAGAATTGACAATAGTGTTGGTGCCATTGC
TGCTGA
GTACGTTCAAATGTACTGCTTTTTAGAAATTTGTTTAGAGCTTTACTGCCTTTCGGATTTCACTTTCTTGTAAAATGAATCTTCCAAATTGTGGTGTTAATTGTCAAGAAATCT
TATAGACAAAGATAAGTAAAACTTGCAAATAAGCATATTGGTTAACATGTAGTGTTGAAGACCATGTTCGACATTCAAAAGTTGAAGTGTTAAGTTCAGCACAATTCACATGTATTAATT
AGTTTATTTATGGATGATTCATATGTGCAAGTTCGATTTGAGAGTTCTCTCTAGCTAGTTGGGATATAGCAAAGACACTCCTTTCCAGTGATTATATATTTCTATGCCCCAATTAGATAA
TAAATTCTAAGAGAACATATGAGAGAATTTGACTTTGAAAGAGGAATGATTCTGCTCACATAAGGTGAATTTAGTTTATCATACTTCCACCGCTAGCATCAACCATTTTAGGAGTGATTT
TTTTCCCAAAATTCGTGATTACTGATTTCCTTATTGAAGGCACTTGACCAAATGTCCTTGAAGCATATAATTTGGTAGTAGAAAGTCGAAATATGAAACATTTTGAGAGTCATCCGTATG
TGAAGAAGATAGGTAGTTACTGCTTGGACTGAAAAAAAAGCATAGAGCGATAAGCTTGGTCACCTTTTCTGCTTTGTGTTAGCAGTTTCGAGTTTGTAATTGCAGGATGAATGTGAGGAA
GTGATTCTAAGGGGAGAAGTTCCGTTTTTGTCGACCCTCTTTGATTTCACTATCGAAATTAAGATCTCAAAAAAATATGCTTGACACTGTAATTATTTGTTTCAAGTTATTTCTTTTAAG
CAATGTAAAATGTAATTACTCCATATATTCCTAAAAGGAGCACTAACTTTCCGTTTGTTTTTGGCAGTGAGAGCTTTCAGGTAAGGGAAGAGATCAGGAAGGTATTATCCAAGAGCAAGG
CTGCTGGTGTACTTCGCCTTGTATTCCATGATGCAGGAACTTTTGAAATTGATGAGAAAACTG
GTAATACTTTGAAACGCTTAGTCCTATCCCTACCCCCCCCCCCCCCCCCAACTATTC
CAATCATTAGCATCTTTCAATTTGTAAGCTAATCACCTTATTTTAGAATCTACAGAGCTGGTCTATAAGTGTTATAACATCATAAATGCACATGGAAATGCTTCTTACACCATTAATTTG
CAAAACCTGTATATATCTTATTTTGTATTTATCCAAAAATATAATAAATTTGTGCAGTATGCAAATATACTTGAAAGAAGAAATTGTTTTGTCTTCCATTCCTGGATACATGATATCAAC
CTCGATTGCTCTTATATTAGGGGGTATGAATGGCTCTATAGTATATGAACTCGACAGACCCGAAAACAAAGGCCTTAAGAAATCTCTAAAGGTAAGTAATTTTATTGCGTATACTCTTTT
CTTTTGTCTCTCCATCATTAGTTTTCTTTTAACCATCCTTGGGAACAGTCCGCAGATATTCTCATTTTAAATGTTAGTTGTTTACCATTTCCAAAGACTGATGAACTCTCATATGTACTT
CAACCAGCTAACATCTCGGTCCATGCATTGTTCTATAGATTCTGGACAAAGCGAAGAGTCAAATTGATCTTGTGCAATCAGGTAAACTGTCTCAGTCAATAAACTGCTGTTAGTTCACCT
ATCATTTTTGTTCCAGCATAACTTTTTTAATTGTTGGCTTTGTTCTCAGTCTCATGGGCTGATATAATAGCTTTGGCTGGAGCTGAAGCTGTTTCATTATGTGGTGGACCTAGTATCCCC
ATTCAGTTGGGAAGAATTGATTCAAT
GTAAGGGCTTTTTTAGTTTATGATAATGTTTACATTTTGCTATATAAGATGTTGGTCCAGTAAATGTGGAGAGAATTGCATCTATTTTTTTATT
TATGCTGTTTAGAAATGGGGATGCAAAGATTTAATAATCAGGATCTTGTGAATCTCTTAAATTTAGCAATAGACAAGTAACTTACAATCTTAATTTAAGCCCTTTGTGGATAGTTCCTTC
TCATTCAAATTGATGGCGTTTATCCATCTAAGCACCAGGTGCCAGAAACTTACCATGAGGAAACCCCTAATGTATGAAGAAACCATATTTCAATTGATTGTCGTAATTTTCTTCCGTATC
TACGTTGTCATAGTTGACTTTGACTATGTAGGGTGCAAGATCCTGAAGGAAAACTTCCTGAAGAATCACTAGATGCCATTAGCTTGAAGCAATGTTTTGAAAGGAAAGGCTTCTCGTGAG
TCTAATGGCTTATTTTTATTTCATCTTCTGCTCTCCTTGTGCTCCATGTTATACCATTCAATTAGCATTCTCATATTGTTTTGATGCCATTGACATAATTTGACTGGGTTTATTTTTGTC
AGTTGCTATTAGAGCAGATAAATAGATAATCTTGTTTGTACTTTTTATGTTTCCTTTGCTTTGCTTTAGTGGATAACAAAAGACTTTTAAGGGTTTTCCCCTTCAATAGCTTCTTCAGAT
GAAGTAATGAGACTTGCGATTCACAAACTGTTGCATCTTTCTTGGCATTTCTAGTGTGTTCTTCACTTGCAACATTCTGATGTTGGGTAATCAGAGGCAGATCCTGGATTTGGAAGTCTA
AGCTTTATTGATGTTTAAAAAGCAGTAGCTATAATTAATCATCAATTATGTAAACATAGACGAGCCTTGACTCATTGGTCTGTTTGAGTTTTATTAGTGATCAAGGGTTTTCTTTCTCGA
CTGTACCAATTCTTTAACAATATATAGGCTCACTATATTTGTCAAAAAAACTGATCAAGCTGGACTTTTAACCGTTGCACCCCTATAATCTTCTAACCAACATTCCAGGAAGCTCTCTTT
TTTAGATTGTGGGCTTTTTGATTAGAATATGTGTAGTCCTCGATGCAGCACTAGTTTTAAAAAGTGCACCAGGCTTGGTTCTCACTCGCTTCCACGGATAGAAAAACCTGACTCTCCAAC
ACTGCTACCATGTGCCCTATTGTTACTCCGGGTGCCAAGAATAGTATTTATATACATTTTCTCATACATATATACAGAGTGTCGTGGCACCCCCACACTTCTACATAGATCCAACCCCCG
TGGGATATACATAAAGTGATAAAACTATTTCTTTCAGGTTAAGCACTTCGCCAATGAACTGGCTTTGTAGCATCAGTAATCCTTTTTAATGAAATGCAGTGTAGACAAACATGGTGATAA
ATAACGTAGTTTGTCACTGTAGCTTGCGTGGATAAATAAGATTTGGTATTCACATGGAGTAGACTTAGTTCTGTACTCTTGTTTTCGTGGAAGTGAACGACCATTAGTTCTGCTCTATTT
CATGAAGCATGTGAATTACTGCTGTATTTCTTCTGTTTCATATGCATCTGGTTTCTCTTTCTCCGGTGTTATAATGTTATGCGATTTAACATATTCTCTCACTTTCCAAGAGCTATTTTG
GATTTTCTATATGATCGTTTCCTTGTCCTTCTGAGTTTCTAATGCATGGGTATGAGACTCTCATAGTTTAGCCCCTCTATTTGGATAATGCATGCGAATACTACTTATACAACATGTATA
TCAAGAACCGAAGAATGTGGCTTTATTAGAAAATTCAATTTAATGTACGCTGTGCTAACATTTGATAAGACAAACTGTATACACTAATTCATATTTTCCTGTACCAATATTAATGTAGCA
TATAGGTTATAGTGAATTGTTAATCTCCATGACATACACAAATTTTCAAAATCATGCATAAGGAGCATATTGCACAGCCAGTGTCATCAAAAAAAGCATATTGCACAGCCAGTCTTTAGG
AGTAATCATTTTGAACCTTAGACCTCTTGGTCTTATTCTAGGCAATATTAAGGAACTCATCTGAAATGATGGTTTTAGAGAACGAAAAAGGGATATTATTTGATCGGTATCCTTCAAAAT
GGGTTTATATTAAATGTATTCAAAATTTTCAATTGCAGGTCTTTCCCCATGTATGTTTTTCTTTTTGAGGCAATCTATATTCAATATGCAGGTAAAGTGTCAGTTGTATGATATTTTGTG
AGTATTCACATGATCATGGCCAAAAGAGCAGATTTAATTGCTCCATAATCTTTCCCCTGCCTCGAGGTTATGGAATTTCAGCTTAGCTGAATAAAATTCCATAACTCATGATTTTTTGCC
TCCTCTATTGGCTGCATCAGTTCAGTACTTTGGGTTTGAGAATTCATTGACTGATAGTTTAAAAACCTAAAAAACACTTCTCAGCTTGGTATTTGGAGAGAGCAACTATTCAAACATTTG
GCTTTTGATAATCATGGTCAGTTGTCAGAGGTCTGAGCAGTCCAGGCTTTAACTCTAAACTTATGCAGTACAACCTCTTGCTCACCTATAATTGGAAAGAAAAAGCTAGATCTGTCTGCC
TAATCTCCATGGATTGTTCATTTTGTTGGCAGAACTCAGGAACTTGTTGCCTTGTCTGGCGCGCATACTCTGGGAAGTAAAGGGTTTGGGAATCCAACTGTCTTCGATAATGAATATTTC
AAGATTCTCATGGAAAAGCCATGGTTGTCCTCAG
GTGACAAATGGCATTTATATGGTATCAAATGGTTATGTGTATATATATTGAATTCATTGAAATAAATAGCAAGCAACTGAATCATC
AGAACCTATGAAGCATTGATGTTCTGAAATGGAAATCCATGTACCTACATGCCTAGAGTTTAGATGATTGTTGCAGAAAACTGTCAAGCAAGATTCGGCTCAGGATAATCTAGGCTGCAA
ATTGTTTATGCTTCAGTATTTATCTGGAATGATGACTCTTTCTGATAATAGAAGGCCCCTTTTTTTAGAATTTTATTCATATGATAATGGGAATCATAAAGAATAATTTCCTTTTTCTTA
ATGTCTTTAACCATGTTGTAGCATTTTATTTCTCTTTCATCTGCACAGGCAGCATGACTAGTATGGTTGGACTTCCCTCTGATAGGGCACTTGTTGAAGATGATGAATGTGTAGGGTATG
GTTTTCTTTGACCTTATGCTATTTAGATTCCTTTATTATGGTTTGGAACAACAACTCCTCCAATTTTATCCTGCTAGCTGAAAGGCAGAATTTTATTCTAGTTTTAGTTCACAAGTTATA
GTATCGTTGTTCTCAGGATTGACCTTCTTTCTAGTAATGAATTCTTCTTGAACAGATGGATATCAAAGTATGCTGAGGACCAGAGTTTATTTTTTGATGATTTCAAGAATGCCTATACTA
AACTTGTTGACACTGGTGCAACTTGGAAGAAAGCATTGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTAACACCGTCGCCGTCGATTGTTGGCTTCTCAGTTCCGGCGTTTCCTCCTTTACATCCACTTCCAAGTTGTACTTTCCGGCCAATTTTTCTCGAAAGCCACGCTTTGGTAGCAAC
ACAATTCGAGCTTCCGCCACCACAAACGGTTCAA
GTGAAGGTGTTATTTACAAAGCGTTATTATGTGGAAGAAGAGCCTTACTATCTATGATTACCTTGCCTCTTGTTATGCCGTGTGAA
AGAATTGACAATAGTGTTGGTGCCATTGCTGCTGA
TGAGAGCTTTCAGGTAAGGGAAGAGATCAGGAAGGTATTATCCAAGAGCAAGGCTGCTGGTGTACTTCGCCTTGTATTCCATGAT
GCAGGAACTTTTGAAATTGATGAGAAAACTG
GGGGTATGAATGGCTCTATAGTATATGAACTCGACAGACCCGAAAACAAAGGCCTTAAGAAATCTCTAAAGATTCTGGACAAAGCGAAG
AGTCAAATTGATCTTGTGCAATCAG
TCTCATGGGCTGATATAATAGCTTTGGCTGGAGCTGAAGCTGTTTCATTATGTGGTGGACCTAGTATCCCCATTCAGTTGGGAAGAATTGATTCA
AT
GGTGCAAGATCCTGAAGGAAAACTTCCTGAAGAATCACTAGATGCCATTAGCTTGAAGCAATGTTTTGAAAGGAAAGGCTTCTCAACTCAGGAACTTGTTGCCTTGTCTGGCGCGCAT
ACTCTGGGAAGTAAAGGGTTTGGGAATCCAACTGTCTTCGATAATGAATATTTCAAGATTCTCATGGAAAAGCCATGGTTGTCCTCAG
GCAGCATGACTAGTATGGTTGGACTTCCCTCT
GATAGGGCACTTGTTGAAGATGATGAATGTGTAGG
ATGGATATCAAAGTATGCTGAGGACCAGAGTTTATTTTTTGATGATTTCAAGAATGCCTATACTAAACTTGTTGACACTGGTGCA
ACTTGGAAGAAAGCATTGTAG

Retrieve as FASTA