Entry information : NtPrx10-1A (tpoxN1 / NtPrx10a)
Entry ID 52
Creation 2006-12-27 (Christophe Dunand)
Last sequence changes 2006-12-27
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-02-18 (Christophe Dunand)
Peroxidase information: NtPrx10-1A (tpoxN1 / NtPrx10a)
Name (synonym) NtPrx10-1A (tpoxN1 / NtPrx10a)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue types Cell culture
Leaves
Trichomes
Vascular tissue
Inducers Pathogen interaction
Tobacco mosaic virus infection
Wounding
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx10-1A
start..stop
S start..stop
NtPrx10-1B 657 0 1..330 1..330
CanPrx01 560 0 1..330 1..332
StPrx28 558 0 1..330 1..331
LePrx06 546 0 1..330 1..332
Literature and cross-references NtPrx10-1A (tpoxN1 / NtPrx10a)
Literature REFERENCE 1 Hiraga,S., Ito,H., Matsui,H., Honma,M. and Ohashi,Y.
cDNA sequences for two novel tobacco peroxidase isoenzymes. Plant Physiol. 120, 1205 (1999).
REFERENCE 2 Sasaki et al., a wound inducible tobacco peroxidase gene expresses preferntially in the vascular tissu
Protein ref. UniProtKB:   Q9XIV8
DNA ref. GenBank:   AJ810538
mRNA ref. GenBank:   AB027753
EST ref. GenBank:   FG634201.1 [5' end]
Cluster/Prediction ref. UniGene:   Nta.3689
Protein sequence: NtPrx10-1A (tpoxN1 / NtPrx10a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (301)
PWM (Da):   %s   35595.06 (32244.4) Transmb domain:   %s   i12-34o
PI (pH):   %s   7.74 (7.99) Peptide Signal:   %s   cut: 30 range:30-330
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEYYHHSINK MAMFMVILVL AIDVTMVLGQ GTRVGFYSST CPRAESIVQS TVRAHFQSDP TVAPGILRMH FHDCFVLGCD GSILIEGSDA ERTAIPNRNL KGFDVIEDAK TQIEAICPGV  VSCADILALA ARDSVVATRG LTWSVPTGRR DGRVSRAADA GDLPAFFDSV DIQKRKFLTK GLNTQDLVAL TGAHTIGTAG CAVIRDRLFN FNSTGGPDPS IDATFLPQLR ALCPQNGDAS 
RRVGLDTGSV NNFDTSYFSN LRNGRGVLES DQKLWTDAST QVFVQRFLGI RGLLGLTFGV EFGRSMVKMS NIEVKTGTNG EIRKVCSAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 2 and 3) and 8 ESTs (AM825685.1...). Unigene compiles ESTs from both alleles. Cultivar="Samsun NN".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TACTTACTCA AATCTCAGAA TTCGTTTATA CTGTTAACAC GTACCATGGA GTACTATCAC CATTCAATTA ACAAAATGGC CATGTTTATG GTTATTCTAG TGCTAGCCAT AGATGTGACT  ATGGTTTTAG GCCAAGGAAC CCGTGTTGGA TTTTATTCCA GTACGTGCCC AAGGGCCGAA TCCATAGTTC AATCAACGGT GAGGGCTCAT TTTCAGTCTG ATCCAACGGT GGCACCAGGA  ATCCTGAGAA TGCACTTCCA TGATTGTTTT GTACTAGGTT GTGATGGTTC TATCCTCATT GAAGGTTCAG ACGCTGAGAG AACTGCTATC CCAAACAGAA ATTTGAAAGG ATTCGACGTT  ATTGAGGATG CTAAGACGCA AATTGAAGCT ATCTGTCCTG GAGTTGTTTC CTGTGCTGAT ATTCTTGCTC TAGCTGCTCG TGATTCCGTT GTTGCGACTA GGGGACTGAC ATGGTCTGTG  CCTACGGGAC GTAGAGATGG GCGAGTTTCG AGAGCnnCTG ATGCGGGTGA CCTGCCAGCT TTTTTTGATT CTGTGGATAT TCAAAAGCGA AAGTTTCTTA CAAAGGGTCT CAACACTCAA 
GATCTTGTCG CCCTTACTGG TGCTCACACT ATTG 

Retrieve as FASTA